Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.23□□□□□ -1.57
VTNP04004 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.23□□□□□ -1.57
VTNP04004 AC009268.1-201ENST00000561352 1203 ntBASIC5.23□□□□□ -1.57
VTNP04004 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.23□□□□□ -1.57
VTNP04004 RN7SL652P-201ENST00000577769 300 ntBASIC5.23□□□□□ -1.57
VTNP04004 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.23□□□□□ -1.57
VTNP04004 MIR5096-201ENST00000583713 70 ntBASIC5.23□□□□□ -1.57
VTNP04004 AC020915.5-201ENST00000596836 964 ntBASIC5.23□□□□□ -1.57
VTNP04004 RPL26P30-202ENST00000602923 645 ntBASIC5.23□□□□□ -1.57
VTNP04004 AC093765.1-201ENST00000603758 881 ntBASIC5.23□□□□□ -1.57
VTNP04004 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.23□□□□□ -1.57
VTNP04004 AC105105.5-201ENST00000622635 1294 ntBASIC5.23□□□□□ -1.57
VTNP04004 AC012414.7-202ENST00000622705 1090 ntBASIC5.23□□□□□ -1.57
VTNP04004 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VTNP04004 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTNP04004 AC025574.1-201ENST00000554784 1653 ntBASIC5.23□□□□□ -1.57
VTNP04004 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.23□□□□□ -1.57
VTNP04004 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTNP04004 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTNP04004 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.23□□□□□ -1.57
VTNP04004 Z95331.1-201ENST00000623075 23112 ntBASIC5.23□□□□□ -1.57
VTNP04004 AP005432.1-201ENST00000580891 3485 ntBASIC5.22□□□□□ -1.57
VTNP04004 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTNP04004 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VTNP04004 SNORD113.2-201ENST00000364166 89 ntBASIC5.22□□□□□ -1.57
VTNP04004 PEX12P1-201ENST00000400284 1048 ntBASIC5.22□□□□□ -1.57
VTNP04004 AL591848.1-201ENST00000413092 322 ntBASIC5.22□□□□□ -1.57
VTNP04004 TRIM60P13-201ENST00000432350 1283 ntBASIC5.22□□□□□ -1.57
VTNP04004 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.22□□□□□ -1.57
VTNP04004 CYCSP24-201ENST00000445119 316 ntBASIC5.22□□□□□ -1.57
VTNP04004 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.22□□□□□ -1.57
VTNP04004 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AL513343.1-201ENST00000451818 792 ntBASIC5.22□□□□□ -1.57
VTNP04004 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AC073073.1-201ENST00000493920 463 ntBASIC5.22□□□□□ -1.57
VTNP04004 HPRT1P1-201ENST00000509498 657 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.22□□□□□ -1.57
VTNP04004 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.22□□□□□ -1.57
VTNP04004 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.22□□□□□ -1.57
VTNP04004 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AC105129.1-201ENST00000560250 297 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
VTNP04004 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.22□□□□□ -1.57
VTNP04004 AC002069.2-201ENST00000603580 883 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC022387.2-201ENST00000604050 448 ntBASIC5.22□□□□□ -1.57
VTNP04004 KATNBL1P1-201ENST00000605192 748 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC007620.3-201ENST00000608131 497 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC019193.2-201ENST00000610012 634 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC003001.2-201ENST00000616294 831 ntBASIC5.22□□□□□ -1.57
VTNP04004 BX005214.3-202ENST00000619809 325 ntBASIC5.22□□□□□ -1.57
VTNP04004 MIR6758-201ENST00000620653 63 ntBASIC5.22□□□□□ -1.57
VTNP04004 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.22□□□□□ -1.57
VTNP04004 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTNP04004 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTNP04004 KARSP3-201ENST00000571212 1504 ntBASIC5.22□□□□□ -1.57
VTNP04004 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTNP04004 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.22□□□□□ -1.57
VTNP04004 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.22□□□□□ -1.57
VTNP04004 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
VTNP04004 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
VTNP04004 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VTNP04004 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
VTNP04004 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.21□□□□□ -1.57
VTNP04004 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.21□□□□□ -1.58
VTNP04004 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 Y_RNA.62-201ENST00000362840 99 ntBASIC5.21□□□□□ -1.58
VTNP04004 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.21□□□□□ -1.58
VTNP04004 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.21□□□□□ -1.58
VTNP04004 AC140479.3-201ENST00000418944 1126 ntBASIC5.21□□□□□ -1.58
VTNP04004 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.21□□□□□ -1.58
VTNP04004 C4BPAP2-201ENST00000428434 478 ntBASIC5.21□□□□□ -1.58
VTNP04004 RPL23AP1-201ENST00000428990 471 ntBASIC5.21□□□□□ -1.58
VTNP04004 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.21□□□□□ -1.58
VTNP04004 ELOCP3-201ENST00000439303 348 ntBASIC5.21□□□□□ -1.58
VTNP04004 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.21□□□□□ -1.58
VTNP04004 AC021660.1-201ENST00000465006 554 ntBASIC5.21□□□□□ -1.58
VTNP04004 NPM1P28-201ENST00000492269 840 ntBASIC5.21□□□□□ -1.58
VTNP04004 SUMO2P4-201ENST00000504193 276 ntBASIC5.21□□□□□ -1.58
VTNP04004 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.21□□□□□ -1.58
VTNP04004 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.21□□□□□ -1.58
VTNP04004 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.21□□□□□ -1.58
VTNP04004 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 MIR4715-201ENST00000584117 79 ntBASIC5.21□□□□□ -1.58
VTNP04004 AP000648.2-201ENST00000624182 404 ntBASIC5.21□□□□□ -1.58
VTNP04004 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.21□□□□□ -1.58
VTNP04004 AC005005.4-201ENST00000623789 16698 ntBASIC5.21□□□□□ -1.58
VTNP04004 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms