Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RPL7AP25-201ENST00000423357 805 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.45□□□□□ -1.54
COL2A1P02458 CBX1P1-201ENST00000440184 427 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 RHEBP2-201ENST00000450289 600 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AP002812.1-201ENST00000495378 474 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC023424.1-201ENST00000496058 459 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 IGKV2-23-201ENST00000518729 323 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.45□□□□□ -1.54
COL2A1P02458 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.45□□□□□ -1.54
COL2A1P02458 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 OR8G7P-201ENST00000616658 848 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC006213.5-201ENST00000619673 288 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
COL2A1P02458 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL2A1P02458 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 AC017079.1-201ENST00000333650 415 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 RPL23AP59-201ENST00000399415 461 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 E2F6P2-201ENST00000420708 748 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 EIF4HP2-201ENST00000424380 563 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AP001324.1-201ENST00000428553 399 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.45□□□□□ -1.54
COL2A1P02458 FHP1-201ENST00000442741 703 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC098799.3-201ENST00000506095 438 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 RNA5SP230-201ENST00000517039 122 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.45□□□□□ -1.54
COL2A1P02458 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.45□□□□□ -1.54
COL2A1P02458 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL2A1P02458 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 MIR4660-201ENST00000583549 74 ntBASIC5.45□□□□□ -1.54
COL2A1P02458 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.45□□□□□ -1.54
COL2A1P02458 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL2A1P02458 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL2A1P02458 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.44□□□□□ -1.54
COL2A1P02458 AC104623.2-202ENST00000623477 4002 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.44□□□□□ -1.54
COL2A1P02458 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.44□□□□□ -1.54
COL2A1P02458 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.44□□□□□ -1.54
COL2A1P02458 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 RPL36AP36-201ENST00000418616 301 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.44□□□□□ -1.54
COL2A1P02458 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.44□□□□□ -1.54
COL2A1P02458 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.44□□□□□ -1.54
COL2A1P02458 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.44□□□□□ -1.54
COL2A1P02458 NDUFB4P12-201ENST00000513465 390 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.44□□□□□ -1.54
COL2A1P02458 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.44□□□□□ -1.54
COL2A1P02458 MIR3939-201ENST00000582614 106 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 AP001160.4-201ENST00000596971 382 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.44□□□□□ -1.54
COL2A1P02458 AP005019.3-201ENST00000620418 560 ntBASIC5.44□□□□□ -1.54
COL2A1P02458 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
COL2A1P02458 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL2A1P02458 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL2A1P02458 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.43□□□□□ -1.54
COL2A1P02458 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL2A1P02458 UGT2B26P-201ENST00000508672 1613 ntBASIC5.43□□□□□ -1.54
COL2A1P02458 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 MIR133A2-201ENST00000347538 102 ntBASIC5.43□□□□□ -1.54
COL2A1P02458 RAD23BP1-201ENST00000421404 1227 ntBASIC5.43□□□□□ -1.54
COL2A1P02458 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.43□□□□□ -1.54
COL2A1P02458 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.43□□□□□ -1.54
COL2A1P02458 AK4P6-201ENST00000505168 528 ntBASIC5.43□□□□□ -1.54
COL2A1P02458 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.43□□□□□ -1.54
COL2A1P02458 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms