Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SNORA74A-201ENST00000364089 198 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 RHOT1P2-201ENST00000366423 333 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSSCA1O60232 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 U3.36-201ENST00000408418 213 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 SNORA79B-201ENST00000410557 148 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 UBTFL3-201ENST00000418934 1024 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC004552.1-201ENST00000419089 348 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 H2AFZP5-201ENST00000446960 382 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC092905.1-201ENST00000467527 949 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.69□□□□□ -1.82
SSSCA1O60232 RPS26P3-201ENST00000470205 348 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 RPS18P6-201ENST00000476880 458 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 UBTFL6-201ENST00000477929 1024 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 RN7SL717P-201ENST00000478343 297 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC090543.2-201ENST00000483963 348 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC004057.1-201ENST00000485827 348 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.69□□□□□ -1.82
SSSCA1O60232 AC140172.1-201ENST00000502928 141 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC006499.6-201ENST00000511169 607 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.69□□□□□ -1.82
SSSCA1O60232 AC107918.3-201ENST00000533272 382 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.69□□□□□ -1.82
SSSCA1O60232 OR11J2P-201ENST00000555298 907 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 SNORD95-201ENST00000579879 68 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 ADAD1P2-201ENST00000588476 646 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC010201.1-201ENST00000605051 540 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AP001521.2-201ENST00000608772 546 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 LINC00901.1-201ENST00000617252 152 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.69□□□□□ -1.82
SSSCA1O60232 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
SSSCA1O60232 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSSCA1O60232 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.69□□□□□ -1.82
SSSCA1O60232 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSSCA1O60232 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.68□□□□□ -1.82
SSSCA1O60232 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSSCA1O60232 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSSCA1O60232 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 MTND4P26-201ENST00000415971 1359 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.68□□□□□ -1.82
SSSCA1O60232 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSSCA1O60232 RN7SKP160-201ENST00000363804 340 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 RNA5SP132-201ENST00000364725 118 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 MIR93-201ENST00000385024 80 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 SNORA68.2-201ENST00000391263 128 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 OR51B3P-201ENST00000412287 913 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 RPL12P43-201ENST00000420608 499 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 PRELID3BP10-201ENST00000431957 584 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.68□□□□□ -1.82
SSSCA1O60232 MTND6P18-201ENST00000439477 513 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 ARAFP2-201ENST00000440565 559 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 HMGB3P9-201ENST00000441799 583 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 PPIAP19-201ENST00000486414 492 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 OR9N1P-201ENST00000491296 333 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AC024558.1-201ENST00000505008 528 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.68□□□□□ -1.82
SSSCA1O60232 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AC024405.1-201ENST00000532521 1042 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AP005119.2-201ENST00000579735 1105 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AC096553.1-201ENST00000605169 829 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AL031666.3-201ENST00000609320 1006 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AC093799.2-201ENST00000610062 578 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AC008115.4-201ENST00000619780 775 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 AL357153.4-201ENST00000620487 1016 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.68□□□□□ -1.82
SSSCA1O60232 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSSCA1O60232 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSSCA1O60232 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 AC139769.1-204ENST00000472297 1931 ntBASIC3.68□□□□□ -1.82
SSSCA1O60232 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
SSSCA1O60232 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SSSCA1O60232 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.67□□□□□ -1.82
SSSCA1O60232 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 NCLP2-201ENST00000416078 1462 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSSCA1O60232 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.67□□□□□ -1.82
SSSCA1O60232 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSSCA1O60232 SNORD74.4-201ENST00000364129 80 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AL672167.2-201ENST00000377164 879 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 Z98745.1-201ENST00000402553 494 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.67□□□□□ -1.82
SSSCA1O60232 GJA6P-201ENST00000415117 1042 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 RPS23P10-201ENST00000416185 486 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms