Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC073909.1-201ENST00000447112 999 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL136380.1-201ENST00000447970 162 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL121877.1-201ENST00000453704 622 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL688P-201ENST00000471754 275 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC083798.1-201ENST00000472671 131 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL7P42-201ENST00000481005 679 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL152P-201ENST00000484176 298 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC093278.1-201ENST00000494700 600 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 OR5BK1P-201ENST00000550421 823 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 DISC2.1-201ENST00000612827 205 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC183089.2-201ENST00000637931 916 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC015871.3-201ENST00000618835 2261 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL021877.2-201ENST00000624442 10684 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 WBP11P1-201ENST00000562560 1931 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007406.5-201ENST00000570140 3170 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 Y_RNA.58-201ENST00000362807 102 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 Y_RNA.154-201ENST00000363624 102 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RNY3P1-201ENST00000365085 102 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU6-282P-201ENST00000365357 103 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RNY3-201ENST00000365484 102 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 Y_RNA.490-201ENST00000384413 102 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 HMGB1P17-201ENST00000403495 628 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 PRUNEP1-201ENST00000425846 705 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL121916.1-201ENST00000429405 308 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RPS3AP54-201ENST00000435535 734 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL031663.1-201ENST00000437445 219 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 MTCYBP6-201ENST00000441810 138 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 HIGD1AP8-201ENST00000453927 274 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL308P-201ENST00000464971 297 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC063943.1-201ENST00000465434 453 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TAAR3P-201ENST00000466706 1078 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007537.2-201ENST00000472093 511 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL88P-201ENST00000480166 299 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TAAR3P-202ENST00000481759 1025 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL17P2-201ENST00000491913 451 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC034159.1-201ENST00000513885 583 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC105029.1-201ENST00000520250 669 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 PMS2P3-207ENST00000529061 717 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 ATP5J2P4-201ENST00000538774 267 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 NANOGNBP2-201ENST00000544753 553 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms