Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MSL3P1-202ENST00000440028 1468 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC100871.1-201ENST00000507871 1456 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MTCO1P6-201ENST00000481192 1384 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 U3.7-201ENST00000363668 216 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 RNA5SP91-201ENST00000390902 119 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 RN7SKP29-201ENST00000410957 272 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01881-201ENST00000416103 412 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MTND2P18-201ENST00000419962 1030 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AL662874.1-201ENST00000426065 230 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 RAC1P8-201ENST00000427086 527 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC007327.1-201ENST00000447461 264 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC091959.2-201ENST00000477363 321 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC091544.1-201ENST00000484702 348 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC117522.2-201ENST00000510049 657 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AP000926.4-201ENST00000527351 454 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 HMGN2P36-201ENST00000529541 409 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MIR1269B-201ENST00000580405 75 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 AC016769.4-201ENST00000616893 535 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 U6.107-201ENST00000637108 79 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 MFSD8-219ENST00000641228 2559 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 CASC19-284ENST00000642142 1868 ntBASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC005261.4-201ENST00000600047 1385 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 RNU1-19P-201ENST00000363306 165 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 RNU5A-2P-201ENST00000384337 116 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 RNU6-171P-201ENST00000384354 107 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ERHP2-201ENST00000402323 299 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AK4P4-201ENST00000419465 646 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AL008629.1-201ENST00000438615 184 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC093166.4-201ENST00000457867 318 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 RNU7-27P-201ENST00000459281 62 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AL133445.1-201ENST00000467051 452 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms