Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 R3HDM2P1-201ENST00000505381 1960 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC009108.3-201ENST00000602739 3515 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 GAPDHP24-201ENST00000328713 983 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 RNA5SP485-201ENST00000365053 119 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 RNU6-619P-201ENST00000365146 108 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 SNORA69-201ENST00000383895 132 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 SNORD115.1-201ENST00000391109 76 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 SNORA11B-201ENST00000408175 129 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AL450992.3-201ENST00000413192 568 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 RPL26P28-201ENST00000451325 435 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 BX248409.1-201ENST00000455497 255 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 DEFB131D-201ENST00000526803 184 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AP002812.4-201ENST00000532139 286 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 DPPA3P2-202ENST00000557188 1219 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC079075.1-201ENST00000559543 878 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 APOC2-205ENST00000592257 444 ntTSL 3 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 SMIM12P1-201ENST00000603004 274 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 IGKV2OR2-1-201ENST00000605129 304 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC006378.2-201ENST00000623178 2476 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 LINC00663-203ENST00000586885 2546 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 AC093297.3-201ENST00000607056 2517 ntBASIC9.35□□□□□ -0.91
PHF8Q9UPP1 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
PHF8Q9UPP1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 SUGT1P1-201ENST00000379514 476 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 SNORA32.2-201ENST00000384049 122 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 RNU6-1106P-201ENST00000390845 107 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AL589647.1-201ENST00000402485 466 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AL359694.1-201ENST00000403247 604 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC114482.1-201ENST00000418010 247 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 OR51AB1P-201ENST00000429046 620 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 MTND2P29-201ENST00000438595 412 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 RPL26P30-201ENST00000453533 435 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 U8.20-201ENST00000459445 131 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 HMGN2P26-201ENST00000463169 339 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 RN7SL283P-201ENST00000489055 303 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AP003122.3-201ENST00000526316 255 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 CYCSP2-201ENST00000558168 301 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 MIR4502-201ENST00000580432 81 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 MIR4742-201ENST00000581069 85 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 HMGN1P30-201ENST00000589286 268 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 SNORD96A-201ENST00000606577 79 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC099654.6-201ENST00000636487 512 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 UOX-205ENST00000640983 544 ntTSL 4 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms