Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 MRE11P1-201ENST00000464884 2127 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC02019-201ENST00000608605 2060 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 MIR130A-201ENST00000385274 89 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 DPPA2P2-201ENST00000418220 897 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 TPTE2P3-201ENST00000441562 1189 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AL161636.2-201ENST00000445179 927 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AL935212.3-201ENST00000450729 284 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC016724.1-201ENST00000453215 421 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 OR2AF1P-201ENST00000454899 889 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 RN7SL570P-201ENST00000484405 292 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 MTCO3P35-201ENST00000485582 781 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 DUTP1-201ENST00000493631 470 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC134050.1-201ENST00000495088 933 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC104109.1-201ENST00000498563 436 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC074255.1-201ENST00000511259 501 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 RN7SKP287-201ENST00000516546 266 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 MRPS16P1-201ENST00000523462 412 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC124293.1-201ENST00000530034 493 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC063977.5-201ENST00000601044 974 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC009159.2-201ENST00000617603 606 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 CIR1P2-201ENST00000514821 1342 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AL355578.1-201ENST00000607405 1328 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 AC096656.1-201ENST00000623826 1364 ntBASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NECTIN3Q9NQS3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 RNU1-146P-201ENST00000364015 165 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 AC007618.1-201ENST00000366455 732 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 RNA5SP91-201ENST00000390902 119 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 RPL34P3-201ENST00000421454 338 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 HIGD1AP12-201ENST00000427832 281 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 HMGB1P45-201ENST00000435986 653 ntBASIC5.36□□□□□ -1.55
NECTIN3Q9NQS3 AC009263.1-201ENST00000441193 1239 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms