Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL691482.1-201ENST00000453255 87 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 RPL21P8-201ENST00000465083 535 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 SETP6-201ENST00000479329 568 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 RNU6-237P-201ENST00000515985 71 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC026403.1-201ENST00000518938 295 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 BUD31P1-201ENST00000521828 359 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 OR7E10P-201ENST00000526420 991 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC087499.8-201ENST00000578406 226 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC119744.1-201ENST00000454746 1715 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 RNA5SP72-201ENST00000364442 117 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 OR1F12-201ENST00000402365 945 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 CR392039.5-201ENST00000623201 510 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 RN7SKP33-201ENST00000410942 340 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 COX6CP15-201ENST00000426313 211 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 U6.105-201ENST00000637379 88 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC107982.3-201ENST00000584957 985 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC067852.5-201ENST00000589299 310 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 IPO5P1-202ENST00000600039 287 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AL139254.3-201ENST00000641097 674 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 AC025574.1-201ENST00000554784 1653 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD8Q9HCK8 PABPC1P8-201ENST00000452851 2086 ntBASIC4.41□□□□□ -1.7
CHD8Q9HCK8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 OR14L1P-202ENST00000641545 3009 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 TLK1P1-201ENST00000456760 2440 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 MIR589-201ENST00000385238 99 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 RPL5P32-201ENST00000454085 879 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 RPL5P23-201ENST00000496040 868 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 AC022726.1-201ENST00000587475 207 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 AC019206.1-201ENST00000621938 425 ntBASIC4.4□□□□□ -1.7
CHD8Q9HCK8 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD8Q9HCK8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AC005005.4-201ENST00000623789 16698 ntBASIC4.4□□□□□ -1.71
CHD8Q9HCK8 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.71
CHD8Q9HCK8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 RN7SKP267-201ENST00000410381 285 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms