Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 EIF3FP1-201ENST00000613970 806 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 MIR6729-201ENST00000618194 65 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC015871.5-202ENST00000623252 701 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC006453.5-201ENST00000636451 619 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AL359922.3-201ENST00000624779 1670 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 SNORA70-201ENST00000384436 135 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 MT-TP-201ENST00000387461 68 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AP000580.1-201ENST00000404439 358 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 U3.35-201ENST00000408405 208 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 MIR1271-201ENST00000408537 86 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RGS17P1-201ENST00000423358 553 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RPS26P4-201ENST00000431743 355 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 PTMAP3-201ENST00000447474 330 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RN7SL727P-201ENST00000482164 296 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RN7SL346P-201ENST00000491561 294 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 HAUS1P1-201ENST00000505275 832 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RN7SKP147-201ENST00000517154 244 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RNU6-709P-201ENST00000517257 104 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC008147.3-201ENST00000548666 354 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC087888.1-201ENST00000550884 1254 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC010424.2-201ENST00000607594 443 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AL133370.2-201ENST00000619934 439 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AC022106.2-201ENST00000620114 757 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 AL450326.2-201ENST00000421913 1962 ntBASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRC40Q9H9A6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 HSPA8P18-201ENST00000439846 1928 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 MIR765-201ENST00000390226 114 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AC092642.1-201ENST00000392417 425 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 RN7SKP229-201ENST00000410465 302 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 GTF2IP5-201ENST00000414608 731 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 GTF3AP1-201ENST00000416942 1004 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AL451139.1-201ENST00000434718 346 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AC093716.1-201ENST00000435923 377 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 CYCSP11-201ENST00000436426 315 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AC092647.3-201ENST00000443044 633 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AC073850.1-201ENST00000449243 255 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 CCRL1P1-201ENST00000449542 1053 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 MYO5BP2-201ENST00000449815 1277 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 C1DP3-201ENST00000455013 423 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AC140172.1-201ENST00000502928 141 ntBASIC4.93□□□□□ -1.62
LRRC40Q9H9A6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms