Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 AC020898.1-201ENST00000474167 787 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AC026979.1-201ENST00000492525 396 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 OR7H2P-201ENST00000513483 306 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AC105031.1-201ENST00000518550 476 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM4Q9C037 PARP1P2-201ENST00000556806 195 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 SNX18P1Y-201ENST00000616231 511 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AC109583.2-201ENST00000617367 129 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 AC099654.3-201ENST00000447087 1546 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 INTS6P1-201ENST00000504674 2530 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5□□□□□ -1.61
TRIM4Q9C037 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 KPNA2P2-201ENST00000419546 1489 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC011503.2-201ENST00000594230 1500 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC093775.1-201ENST00000624154 1868 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 MIR589-201ENST00000385238 99 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 CBX1P3-201ENST00000413296 527 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 COX6B1P1-201ENST00000415962 213 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 RPS12P5-201ENST00000423449 371 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC104634.1-201ENST00000452720 462 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 RPL23AP72-201ENST00000492447 435 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC093720.1-201ENST00000505681 714 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 SCARNA16.4-201ENST00000516956 187 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 YWHABP2-201ENST00000540201 713 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 GLRXP2-201ENST00000555594 321 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC008814.1-201ENST00000603797 406 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC009027.1-201ENST00000604510 479 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 WBP1LP8-201ENST00000617401 327 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 MIR7703-201ENST00000620784 77 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM4Q9C037 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM4Q9C037 SCARNA15-201ENST00000607520 4325 ntBASIC4.99□□□□□ -1.61
TRIM4Q9C037 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 SNORA70.2-201ENST00000364506 135 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 OR2X1P-201ENST00000421144 687 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AC046176.1-201ENST00000435260 1170 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 TRY2P-201ENST00000448860 689 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AC009127.1-201ENST00000467090 155 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 RN7SL423P-201ENST00000486202 304 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AC026402.1-201ENST00000513642 170 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 MIR4270-201ENST00000581799 70 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms