Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 GTF2IP2-201ENST00000424290 697 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 HIGD1AP12-201ENST00000427832 281 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 THAP5P1-201ENST00000439089 262 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 CDY12P-201ENST00000440679 1015 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL592437.1-201ENST00000443781 492 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 RPL34P26-201ENST00000445636 354 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 CDY13P-201ENST00000445813 1015 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 OTX2P1-201ENST00000450956 354 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 RN7SL269P-201ENST00000467795 305 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC104109.1-201ENST00000498563 436 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC105384.2-201ENST00000508433 640 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC138866.2-201ENST00000508650 584 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC119751.1-201ENST00000513357 765 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 IGLVIV-64-201ENST00000518581 301 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AP000926.4-201ENST00000527351 454 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 OR5AK3P-201ENST00000527486 1297 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AP003396.4-201ENST00000527574 265 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC109446.2-201ENST00000567872 497 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 MTCYBP33-201ENST00000575007 1130 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL020997.3-201ENST00000602843 359 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 HIRAP1-201ENST00000605318 787 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC013468.1-201ENST00000608680 598 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC122108.2-201ENST00000611946 526 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC024257.5-201ENST00000612739 531 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC129778.1-202ENST00000623812 261 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL591379.1-207ENST00000635982 261 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 SAMMSON-227ENST00000642114 1199 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC073136.1-201ENST00000449426 2884 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SNX18Q96RF0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SNX18Q96RF0 AF287957.1-201ENST00000607368 1595 ntBASIC5.21□□□□□ -1.57
SNX18Q96RF0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SNX18Q96RF0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC008627.1-201ENST00000517511 1704 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 SNORA70.6-201ENST00000383934 134 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 RNU1-136P-201ENST00000384181 164 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 RNA5SP91-201ENST00000390902 119 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 HMGB3P18-201ENST00000406327 590 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 RN7SKP286-201ENST00000410894 299 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 OR6C64P-201ENST00000419708 825 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 C1DP1-201ENST00000426049 402 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC242426.1-201ENST00000435270 960 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 CASP3P1-201ENST00000446037 609 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC005077.1-201ENST00000449226 375 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 PPIAP20-201ENST00000449839 135 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AL133217.1-201ENST00000450980 425 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 CFL1P4-201ENST00000451536 498 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 OR2AF1P-201ENST00000454899 889 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 SETP20-201ENST00000457046 852 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC004129.2-201ENST00000457229 287 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 ACA64.1-201ENST00000459171 127 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms