Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC138866.2-201ENST00000508650 584 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC117522.2-201ENST00000510049 657 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 BTG4P1-201ENST00000510421 183 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 RN7SKP70-201ENST00000516655 271 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC040958.1-201ENST00000561102 201 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 NDUFA5P11-201ENST00000567995 343 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL035411.2-201ENST00000604022 421 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC019131.2-201ENST00000609071 870 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL159169.2-201ENST00000610061 1269 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL096712.1-201ENST00000614561 159 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC013470.4-201ENST00000619978 986 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AP002782.1-201ENST00000623107 614 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 LINC01963-201ENST00000562038 3148 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC005005.4-201ENST00000623789 16698 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 BRAFP1-201ENST00000445336 2703 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RNA5SP46-201ENST00000362370 120 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RNU1-19P-201ENST00000363306 165 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RNU6-636P-201ENST00000384598 107 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 SNORA48.4-201ENST00000391089 134 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 HMGN1P20-201ENST00000411849 300 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 COX5BP7-201ENST00000414780 274 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RPS3P2-201ENST00000421346 701 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 USP9YP11-201ENST00000427537 717 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 TXNL1P1-201ENST00000429528 554 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RPL12P17-201ENST00000432393 498 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 HSFY3P-201ENST00000444242 1191 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AL672138.1-201ENST00000450604 1015 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RPL7P45-201ENST00000455851 743 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RPL7P41-201ENST00000485823 957 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 NIFKP7-201ENST00000503365 834 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 MYL12BP2-201ENST00000503948 512 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC008837.1-201ENST00000511513 412 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RNA5SP303-201ENST00000516192 130 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC104417.1-201ENST00000523974 751 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AL049870.4-201ENST00000555741 486 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AL049872.1-201ENST00000556323 322 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AGGF1P6-201ENST00000569213 976 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RBM22P1-201ENST00000578589 1214 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC100767.2-201ENST00000604840 693 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC012557.1-201ENST00000607115 611 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC109583.2-201ENST00000617367 129 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC078883.4-201ENST00000623218 367 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC132068.1-201ENST00000623805 459 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 OR13C1P-202ENST00000641378 2919 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 AC017007.4-201ENST00000503353 1352 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms