Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 TRIM60P14-201ENST00000513444 1419 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AL049780.3-201ENST00000624612 1583 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 PWAR1-201ENST00000624188 2414 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 HSPA8P18-201ENST00000439846 1928 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 NUP58P1-201ENST00000502546 1738 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL161891.1-201ENST00000621575 4636 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PPBPP2-201ENST00000513150 1362 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 OR5J1P-201ENST00000313544 939 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PPIAP22-201ENST00000358455 498 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-921P-201ENST00000384361 107 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RNA5SP297-201ENST00000391029 113 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC087752.1-201ENST00000391360 558 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PRRC2CP1-201ENST00000404428 159 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RN7SKP32-201ENST00000410167 303 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MTCO3P46-201ENST00000425787 232 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PRPS1P2-201ENST00000430496 937 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 GAPDHP32-201ENST00000433816 998 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL590326.1-201ENST00000460857 334 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RPL21P6-201ENST00000479171 504 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RN7SL332P-201ENST00000482163 254 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 SNORA40.12-201ENST00000516329 111 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC105029.1-201ENST00000520250 669 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PDCD5P1-201ENST00000543528 309 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC093027.1-201ENST00000546698 429 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MIR4642-201ENST00000583943 82 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MIR4786-201ENST00000583954 80 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC007255.2-201ENST00000604053 631 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC020765.1-201ENST00000604296 328 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 AC243654.2-201ENST00000612843 443 ntBASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms