Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6□□□□□ -1.45
ATG4DQ86TL0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AL157687.1-201ENST00000554853 619 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6□□□□□ -1.45
ATG4DQ86TL0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6□□□□□ -1.45
ATG4DQ86TL0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6□□□□□ -1.45
ATG4DQ86TL0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AC036176.3-201ENST00000602456 418 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 AC091488.1-201ENST00000604239 660 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 AC024560.3-201ENST00000608482 349 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 AC015819.1-201ENST00000613588 663 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 AC023158.2-201ENST00000614876 543 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AC069542.2-201ENST00000624816 216 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AC007603.3-201ENST00000636915 979 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 HSPA8P17-201ENST00000427029 1382 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AC007342.7-201ENST00000624610 2337 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6□□□□□ -1.45
ATG4DQ86TL0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 CUL4AP1-201ENST00000514750 1863 ntBASIC6□□□□□ -1.45
ATG4DQ86TL0 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ATG4DQ86TL0 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4DQ86TL0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC109315.1-201ENST00000584143 1347 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 VN2R3P-201ENST00000422626 1412 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 RARSP1-201ENST00000542842 1418 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC117529.2-201ENST00000512159 2068 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC010624.4-201ENST00000597606 1351 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 SNORA63C-201ENST00000364578 129 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 RNU6-1122P-201ENST00000384449 107 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL023284.3-201ENST00000407767 334 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC010385.1-201ENST00000412374 256 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 CYCSP52-201ENST00000422857 310 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 RPL7P44-201ENST00000424827 742 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 TIMM9P3-201ENST00000428659 274 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL451136.1-201ENST00000435399 325 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC234064.1-201ENST00000436312 247 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL356121.1-201ENST00000442911 156 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC010240.2-201ENST00000445363 1205 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 HMGB1P16-201ENST00000447155 540 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 HMGB1P5-202ENST00000451497 985 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC099340.1-201ENST00000475247 599 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 LARP1BP2-201ENST00000486594 519 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 RN7SL37P-201ENST00000490461 307 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 H3F3AP3-201ENST00000497682 407 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 KCTD9P6-201ENST00000522306 950 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 KCTD9P4-201ENST00000526766 1166 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL162632.2-201ENST00000553933 399 ntBASIC5.99□□□□□ -1.45
ATG4DQ86TL0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms