Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPL34P27-201ENST00000428810 349 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AL050341.1-201ENST00000447743 313 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC022336.1-201ENST00000475510 337 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 RBM43P1-201ENST00000476891 1081 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC091959.2-201ENST00000477363 321 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC013828.1-201ENST00000481845 158 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC092824.1-201ENST00000483524 576 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC006499.5-201ENST00000505037 514 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC073358.1-201ENST00000505671 684 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC083906.1-201ENST00000509298 406 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 OR5AK1P-201ENST00000524837 922 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 MIR5708-201ENST00000579723 85 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 DUXAP4-201ENST00000603046 613 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AL157899.1-201ENST00000604110 936 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC131902.3-201ENST00000611767 581 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC135507.2-201ENST00000612443 309 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC010329.1-201ENST00000593903 8328 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC110373.1-201ENST00000505994 3505 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 LINC01616-201ENST00000561816 2280 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 ABCA11P-202ENST00000504019 2110 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC009135.2-201ENST00000624136 1768 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.9-201ENST00000362354 101 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.263-201ENST00000364659 114 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 OR1L1-202ENST00000373686 1083 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 TAF9BP1-201ENST00000396646 746 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC008850.1-201ENST00000427546 362 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC108479.1-201ENST00000431142 427 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 MTND1P28-201ENST00000435623 950 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 EMC3-AS1-205ENST00000438698 534 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 UBE2V1P3-201ENST00000439651 417 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 ARL5AP2-201ENST00000444698 533 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 NIPA2P5-201ENST00000452282 464 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC098824.1-201ENST00000453565 980 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC097173.1-201ENST00000505862 819 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 IMPA1P1-201ENST00000510718 842 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC022483.1-201ENST00000514020 567 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 snoZ278.1-201ENST00000517059 112 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms