Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HSPG2P98160 AC092376.2-201ENST00000622621 4116 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AC007991.1-201ENST00000522680 631 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 TVP23BP1-201ENST00000557500 617 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 AC005412.1-201ENST00000580812 1049 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 AC007546.1-201ENST00000619452 559 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AC008033.1-201ENST00000216407 1162 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 RNA5SP223-201ENST00000365174 120 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 MTND4LP17-201ENST00000414607 293 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 VN1R37P-201ENST00000419096 748 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC2.77□□□□□ -1.97
HSPG2P98160 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2.77□□□□□ -1.97
HSPG2P98160 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC2.77□□□□□ -1.97
HSPG2P98160 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC2.77□□□□□ -1.97
HSPG2P98160 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.77□□□□□ -1.97
HSPG2P98160 MIR3651-201ENST00000630427 90 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC2.77□□□□□ -1.97
HSPG2P98160 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HSPG2P98160 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.77□□□□□ -1.97
HSPG2P98160 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AC116312.1-201ENST00000606841 314 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 ZNF285B-201ENST00000561698 1767 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HSPG2P98160 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 AL161912.2-201ENST00000565707 3007 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HSPG2P98160 AP000580.1-201ENST00000404439 358 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RNA5SP36-201ENST00000410197 133 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 EIF4A1P3-201ENST00000411521 244 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC2.76□□□□□ -1.97
HSPG2P98160 AL390879.1-201ENST00000439143 386 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 PAICSP4-201ENST00000517543 1253 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 GTF2IP22-201ENST00000554443 182 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 KC877982.1-201ENST00000602313 470 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 MIR6891-201ENST00000618788 93 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AL356121.2-201ENST00000624715 780 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 AL929601.4-201ENST00000613011 1341 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HSPG2P98160 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 AC007390.2-201ENST00000606229 3803 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 RN7SKP284-201ENST00000411002 343 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 VN1R51P-201ENST00000411675 945 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AL450992.3-201ENST00000413192 568 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AC011933.1-201ENST00000413334 321 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AC021876.1-201ENST00000425959 359 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AC116533.1-201ENST00000459748 321 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RN7SL429P-201ENST00000479090 223 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RN7SL489P-201ENST00000486185 223 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RN7SL327P-201ENST00000488659 223 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RNA5SP49-201ENST00000516450 115 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 SUMO2P19-201ENST00000518920 295 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AP001804.1-201ENST00000526868 919 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RN7SL853P-201ENST00000617250 223 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC2.76□□□□□ -1.97
HSPG2P98160 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms