Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3AP84243 AP001273.1-201ENST00000624493 3152 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
H3F3AP84243 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3AP84243 AL133270.1-201ENST00000402635 279 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 ARL4AP5-201ENST00000404372 599 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 OR51B3P-201ENST00000412287 913 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3AP84243 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3AP84243 AC013268.2-201ENST00000420753 337 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AL358176.3-201ENST00000420757 454 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AC104837.2-201ENST00000427236 424 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 AC073587.1-201ENST00000447093 876 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 RHEBP2-201ENST00000450289 600 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 RN7SL610P-201ENST00000463845 291 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 AC020890.1-201ENST00000491837 504 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.28□□□□□ -1.72
H3F3AP84243 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3AP84243 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 AC093249.4-201ENST00000564755 259 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3AP84243 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.28□□□□□ -1.72
H3F3AP84243 AL512782.1-201ENST00000603093 364 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 AL031320.1-201ENST00000604177 357 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 FAM27B-201ENST00000610601 213 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
H3F3AP84243 AP001005.3-201ENST00000622049 129 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3AP84243 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3AP84243 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3AP84243 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3AP84243 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
H3F3AP84243 AC132825.1-201ENST00000463573 2247 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 AC007382.1-201ENST00000624376 2618 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 BMS1P3-201ENST00000372011 932 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
H3F3AP84243 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
H3F3AP84243 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC004074.1-201ENST00000421810 1063 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3AP84243 OR1H1P-201ENST00000448731 937 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC063943.1-201ENST00000465434 453 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 TCP11X3P-202ENST00000514289 1254 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 RNA5SP303-201ENST00000516192 130 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 RNA5SP464-201ENST00000516251 108 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 KCTD9P6-201ENST00000522306 950 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC133555.2-201ENST00000550213 292 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 FKBP1BP1-201ENST00000553366 325 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3AP84243 MIR3667-201ENST00000581025 74 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 MIR4436B2-201ENST00000581415 91 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 MIR4436B1-201ENST00000583272 91 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3AP84243 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 AL049539.1-201ENST00000611964 459 ntBASIC4.27□□□□□ -1.73
H3F3AP84243 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.27□□□□□ -1.73
H3F3AP84243 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.27□□□□□ -1.73
H3F3AP84243 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
H3F3AP84243 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
H3F3AP84243 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3AP84243 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
H3F3AP84243 SDAD1P1-202ENST00000524156 2051 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AL121950.1-201ENST00000624993 2077 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 RNA5SP191-201ENST00000362585 102 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AL590762.2-201ENST00000395798 571 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 RN7SKP247-201ENST00000411094 308 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 RSU1P3-201ENST00000412878 835 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 BX510359.2-201ENST00000417920 305 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC013470.3-201ENST00000420252 1194 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 E2F6P2-201ENST00000420708 748 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms