Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC015689.2-201ENST00000528172 1738 ntBASIC5.31□□□□□ -1.56
SUMO3P55854 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.31□□□□□ -1.56
SUMO3P55854 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.31□□□□□ -1.56
SUMO3P55854 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SUMO3P55854 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SUMO3P55854 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 RN7SKP78-201ENST00000364711 318 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.3□□□□□ -1.56
SUMO3P55854 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.3□□□□□ -1.56
SUMO3P55854 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 RN7SKP279-201ENST00000411383 298 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AL354890.1-201ENST00000413730 346 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 GTF2IP23-201ENST00000423746 351 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.3□□□□□ -1.56
SUMO3P55854 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 AC004129.2-201ENST00000457229 287 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 CR383656.1-201ENST00000484916 377 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 RPS27P23-201ENST00000487608 251 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.3□□□□□ -1.56
SUMO3P55854 AC008494.2-201ENST00000514544 370 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AC092709.1-201ENST00000521355 1045 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.3□□□□□ -1.56
SUMO3P55854 AP003461.1-201ENST00000528866 78 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.3□□□□□ -1.56
SUMO3P55854 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.3□□□□□ -1.56
SUMO3P55854 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.3□□□□□ -1.56
SUMO3P55854 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.3□□□□□ -1.56
SUMO3P55854 AC115085.1-201ENST00000588924 229 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AC010503.3-201ENST00000594355 540 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AL513327.3-201ENST00000602618 469 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AL138895.2-201ENST00000603019 178 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AL137072.1-201ENST00000603444 466 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AP003973.1-201ENST00000604639 691 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AC114878.2-201ENST00000604863 1251 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 FAM27E4-201ENST00000605259 342 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AL021707.7-201ENST00000607991 416 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AC023158.2-201ENST00000614876 543 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 AC007490.1-201ENST00000624321 703 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.3□□□□□ -1.56
SUMO3P55854 OR11H2-202ENST00000641517 1085 ntBASIC5.3□□□□□ -1.56
SUMO3P55854 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SUMO3P55854 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SUMO3P55854 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SUMO3P55854 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SUMO3P55854 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.29□□□□□ -1.56
SUMO3P55854 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SUMO3P55854 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 AC023490.2-201ENST00000359859 470 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 Y_RNA.192-201ENST00000363977 102 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 RNA5SP500-201ENST00000364486 119 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SUMO3P55854 RNU5A-2P-201ENST00000384337 116 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 MIR621-201ENST00000384919 96 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SUMO3P55854 SNORD65.1-201ENST00000390889 71 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 OR7E101P-201ENST00000400428 513 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 AL356131.1-201ENST00000405826 414 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 RN7SKP29-201ENST00000410957 272 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 MTND4P22-201ENST00000413116 1169 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.29□□□□□ -1.56
SUMO3P55854 AC092651.1-201ENST00000426110 312 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 USP9YP31-201ENST00000431405 881 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 MTND1P32-201ENST00000433043 938 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 ACTR3P2-201ENST00000439585 1257 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.29□□□□□ -1.56
SUMO3P55854 OR7E116P-201ENST00000448529 957 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.29□□□□□ -1.56
SUMO3P55854 AC104978.1-201ENST00000449387 391 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 AC104306.1-201ENST00000449702 371 ntBASIC5.29□□□□□ -1.56
SUMO3P55854 MEMO1P4-201ENST00000453590 386 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms