Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.67□□□□□ -1.66
PKNOX1P55347 IL6STP1-201ENST00000346911 1020 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.67□□□□□ -1.66
PKNOX1P55347 RN7SKP206-201ENST00000410823 293 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 GTF2IP5-201ENST00000414608 731 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.67□□□□□ -1.66
PKNOX1P55347 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 NIP7P2-201ENST00000485801 544 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC106872.4-201ENST00000510050 523 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 RNA5SP392-201ENST00000516905 112 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AC008676.3-201ENST00000521237 435 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 MIR3176-201ENST00000582210 90 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AP001521.2-201ENST00000608772 546 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 MIR6768-201ENST00000610734 72 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.67□□□□□ -1.66
PKNOX1P55347 MIR4302-201ENST00000638058 60 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 LINC01739-205ENST00000641890 573 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.67□□□□□ -1.66
PKNOX1P55347 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 AC120338.1-201ENST00000625074 1541 ntBASIC4.67□□□□□ -1.66
PKNOX1P55347 AC093775.1-201ENST00000624154 1868 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
PKNOX1P55347 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PKNOX1P55347 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.66□□□□□ -1.66
PKNOX1P55347 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 OR51C1P-202ENST00000641159 1444 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AC099654.2-201ENST00000433031 1980 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PKNOX1P55347 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PKNOX1P55347 MIR195-201ENST00000385194 87 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 SNORA11.5-201ENST00000408163 128 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 GJA6P-201ENST00000415117 1042 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 LINC00993-201ENST00000420453 540 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.66□□□□□ -1.66
PKNOX1P55347 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 SLC25A18P1-201ENST00000449385 454 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AURKAPS1-201ENST00000451805 1212 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 RPL23AP56-201ENST00000460778 453 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AC091917.2-201ENST00000505002 744 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC004980.4-201ENST00000513375 203 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PKNOX1P55347 FKBP1BP1-201ENST00000553366 325 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 RN7SL52P-201ENST00000584271 284 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC006116.3-201ENST00000592968 361 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AL137072.1-201ENST00000603444 466 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC011815.3-201ENST00000624194 473 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PKNOX1P55347 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 TLK1P1-201ENST00000456760 2440 ntBASIC4.66□□□□□ -1.66
PKNOX1P55347 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PKNOX1P55347 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PKNOX1P55347 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PKNOX1P55347 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PKNOX1P55347 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PKNOX1P55347 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PKNOX1P55347 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.65□□□□□ -1.66
PKNOX1P55347 ZFRP1-201ENST00000457579 2970 ntBASIC4.65□□□□□ -1.66
PKNOX1P55347 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PKNOX1P55347 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PKNOX1P55347 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PKNOX1P55347 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.65□□□□□ -1.66
PKNOX1P55347 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PKNOX1P55347 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.65□□□□□ -1.66
PKNOX1P55347 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PKNOX1P55347 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PKNOX1P55347 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PKNOX1P55347 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PKNOX1P55347 RNA5SP435-201ENST00000364044 108 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 ARL4AP5-201ENST00000404372 599 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 AL080315.1-201ENST00000406055 466 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms