Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 MRPL35P2-201ENST00000448009 511 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 AC022431.1-201ENST00000450941 438 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 Z92846.1-201ENST00000456203 268 ntBASIC4.97□□□□□ -1.61
CDH13P55290 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 AC023141.9-201ENST00000458734 412 ntBASIC4.97□□□□□ -1.61
CDH13P55290 RN7SL717P-201ENST00000478343 297 ntBASIC4.97□□□□□ -1.61
CDH13P55290 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 GTF2F2P1-201ENST00000511083 675 ntBASIC4.97□□□□□ -1.61
CDH13P55290 RPS27AP18-201ENST00000515536 459 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 RN7SKP141-201ENST00000516167 338 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 AC113192.3-201ENST00000529152 742 ntBASIC4.97□□□□□ -1.61
CDH13P55290 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH13P55290 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH13P55290 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH13P55290 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH13P55290 AC016542.1-201ENST00000608259 493 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH13P55290 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 AP001962.1-201ENST00000624114 559 ntBASIC4.97□□□□□ -1.61
CDH13P55290 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH13P55290 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDH13P55290 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDH13P55290 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDH13P55290 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDH13P55290 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.96□□□□□ -1.61
CDH13P55290 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CDH13P55290 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH13P55290 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH13P55290 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH13P55290 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH13P55290 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH13P55290 XKRYP4-201ENST00000414395 483 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AL513325.1-201ENST00000417716 1034 ntBASIC4.96□□□□□ -1.62
CDH13P55290 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH13P55290 DPY19L1P2-201ENST00000426647 915 ntBASIC4.96□□□□□ -1.62
CDH13P55290 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH13P55290 RPL12P11-201ENST00000439970 501 ntBASIC4.96□□□□□ -1.62
CDH13P55290 RNFT1P2-201ENST00000443064 757 ntBASIC4.96□□□□□ -1.62
CDH13P55290 XKRYP5-201ENST00000449659 483 ntBASIC4.96□□□□□ -1.62
CDH13P55290 HMGB1P26-201ENST00000452520 628 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AC144530.1-201ENST00000452862 555 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 EIF2S2P5-201ENST00000457635 968 ntBASIC4.96□□□□□ -1.62
CDH13P55290 RN7SL443P-201ENST00000464331 290 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AC093763.2-201ENST00000505334 1223 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH13P55290 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 NDUFB4P11-201ENST00000560510 395 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH13P55290 AC005776.1-201ENST00000603164 290 ntBASIC4.96□□□□□ -1.62
CDH13P55290 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH13P55290 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH13P55290 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 RPSAP73-201ENST00000614820 330 ntBASIC4.96□□□□□ -1.62
CDH13P55290 AC007342.8-201ENST00000623278 678 ntBASIC4.96□□□□□ -1.62
CDH13P55290 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 MTCO1P4-201ENST00000520516 1409 ntBASIC4.96□□□□□ -1.62
CDH13P55290 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH13P55290 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH13P55290 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH13P55290 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 RNA5SP242-201ENST00000364171 118 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms