Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC114781.5-201ENST00000615297 108 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 ZYXP1-201ENST00000617638 118 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC000095.2-202ENST00000637415 154 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL12P48061 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CXCL12P48061 ASNSP1-204ENST00000641977 1664 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.75□□□□□ -1.65
CXCL12P48061 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CXCL12P48061 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 AC108467.2-201ENST00000617640 1597 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 OR14L1P-202ENST00000641545 3009 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 AC016745.2-201ENST00000608834 3443 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 RNA5SP28-201ENST00000363841 119 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 AL050305.1-201ENST00000399993 1230 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 Z98745.1-201ENST00000402553 494 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 AL451139.1-201ENST00000434718 346 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 AC073052.1-201ENST00000440417 714 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL12P48061 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL12P48061 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 MTND4LP2-201ENST00000502312 285 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 SNORA31.9-201ENST00000516429 84 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL12P48061 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL12P48061 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL12P48061 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.75□□□□□ -1.65
CXCL12P48061 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL12P48061 OR7A19P-201ENST00000608051 733 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 AC012409.3-201ENST00000611343 981 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.75□□□□□ -1.65
CXCL12P48061 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CXCL12P48061 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL12P48061 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.75□□□□□ -1.65
CXCL12P48061 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CXCL12P48061 UGT2B26P-201ENST00000508672 1613 ntBASIC4.75□□□□□ -1.65
CXCL12P48061 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.74□□□□□ -1.65
CXCL12P48061 Z95331.1-201ENST00000623075 23112 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CXCL12P48061 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CXCL12P48061 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL12P48061 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 MIR134-201ENST00000385258 73 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 RNU11-201ENST00000387069 134 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 ST13P16-201ENST00000401760 781 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 NACAP7-201ENST00000407371 609 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 U3.32-201ENST00000408116 212 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 PCNPP4-201ENST00000414817 517 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 TMBIM7P-201ENST00000418074 855 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL12P48061 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL12P48061 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 AL359073.1-201ENST00000448036 403 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL12P48061 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.74□□□□□ -1.65
CXCL12P48061 AC026688.1-201ENST00000520639 1168 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 AC136777.2-201ENST00000522979 358 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL12P48061 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL12P48061 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 AC106785.1-201ENST00000565935 262 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL12P48061 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL12P48061 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL12P48061 AL360012.1-201ENST00000602813 131 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 MIR92B-201ENST00000607575 96 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 BX005214.3-202ENST00000619809 325 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 AC008785.1-201ENST00000624475 456 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 U3.53-201ENST00000628922 216 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CXCL12P48061 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL12P48061 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL12P48061 AC006971.1-201ENST00000407916 4486 ntBASIC4.74□□□□□ -1.65
CXCL12P48061 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CXCL12P48061 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL12P48061 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL12P48061 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 RPS26P8-201ENST00000393490 348 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms