Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NDUFB4P11-201ENST00000560510 395 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC8P31273 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC8P31273 MTCO2P22-201ENST00000603246 681 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 AC005014.3-201ENST00000605985 190 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 AL606537.1-201ENST00000607258 2011 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 AC003001.2-201ENST00000616294 831 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 RBPJP2-201ENST00000618187 1444 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 AC019080.5-201ENST00000624891 757 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC8P31273 AC026523.2-201ENST00000625039 7739 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC8P31273 NCLP2-201ENST00000416078 1462 ntBASIC5.44□□□□□ -1.54
HOXC8P31273 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC8P31273 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HOXC8P31273 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC8P31273 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC8P31273 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC8P31273 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 VPS35P1-201ENST00000563400 1518 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 Z98755.1-201ENST00000407015 1384 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 DHX40P1-201ENST00000588725 1412 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC010928.1-201ENST00000592477 1447 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXC8P31273 MIR421-201ENST00000365696 85 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 RNA5SP332-201ENST00000391063 115 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXC8P31273 AL645608.4-201ENST00000423619 154 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 RPL23AP4-201ENST00000427757 463 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 AC016712.1-201ENST00000431088 378 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC093716.1-201ENST00000435923 377 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 MTCYBP29-201ENST00000436327 1006 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 RPS5P7-201ENST00000456664 608 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC091180.1-201ENST00000462104 372 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 ENPP7P9-201ENST00000514456 627 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 MIR4697-201ENST00000582977 78 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC098935.2-201ENST00000604222 466 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 KATNBL1P1-201ENST00000605192 748 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC018695.5-201ENST00000605872 315 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 AC010424.2-201ENST00000607594 443 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 AC091932.2-201ENST00000623014 291 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 LINC00216-201ENST00000623548 1126 ntBASIC5.43□□□□□ -1.54
HOXC8P31273 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HOXC8P31273 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXC8P31273 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HOXC8P31273 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC8P31273 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC8P31273 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC8P31273 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC097063.1-201ENST00000426714 1797 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 RNU6-249P-201ENST00000363016 102 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 RPL5P19-201ENST00000404228 893 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AL035079.1-201ENST00000405210 287 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXC8P31273 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC8P31273 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 MTATP6P11-201ENST00000428071 670 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AL606490.7-201ENST00000433136 191 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 MTND2P40-201ENST00000436718 841 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 SCAND3P1-201ENST00000439854 1060 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms