Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 RPL21P136-201ENST00000605378 396 ntBASIC5.66□□□□□ -1.5
ACTN1P12814 AC015922.4-201ENST00000612568 690 ntBASIC5.66□□□□□ -1.5
ACTN1P12814 AL627230.1-201ENST00000613077 211 ntBASIC5.66□□□□□ -1.5
ACTN1P12814 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN1P12814 AL591926.8-201ENST00000616876 211 ntBASIC5.66□□□□□ -1.5
ACTN1P12814 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.66□□□□□ -1.5
ACTN1P12814 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
ACTN1P12814 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN1P12814 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN1P12814 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN1P12814 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN1P12814 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN1P12814 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN1P12814 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN1P12814 TRIM51GP-201ENST00000534741 1350 ntBASIC5.66□□□□□ -1.5
ACTN1P12814 TTC39DP-201ENST00000416781 1688 ntBASIC5.66□□□□□ -1.5
ACTN1P12814 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN1P12814 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN1P12814 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 AC010266.2-201ENST00000564741 3255 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN1P12814 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ACTN1P12814 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 AC079741.1-201ENST00000321498 212 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN1P12814 SNORA66-201ENST00000384792 133 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ACTN1P12814 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN1P12814 RN7SKP114-201ENST00000410327 279 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.65□□□□□ -1.5
ACTN1P12814 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.65□□□□□ -1.5
ACTN1P12814 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.65□□□□□ -1.5
ACTN1P12814 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 AL161722.2-201ENST00000434731 981 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 SNRPFP2-201ENST00000440710 251 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 RPS15AP29-201ENST00000445539 400 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN1P12814 AC009963.2-201ENST00000453431 138 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN1P12814 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN1P12814 AC063943.1-201ENST00000465434 453 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AC006967.1-201ENST00000467608 589 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 RN7SL189P-201ENST00000468631 289 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.65□□□□□ -1.5
ACTN1P12814 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN1P12814 RPL23AP72-201ENST00000492447 435 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 RNA5SP230-201ENST00000517039 122 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 NMNAT1P1-201ENST00000554095 876 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN1P12814 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN1P12814 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 MIR4660-201ENST00000583549 74 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 AC009704.2-201ENST00000618739 483 ntBASIC5.65□□□□□ -1.5
ACTN1P12814 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN1P12814 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
ACTN1P12814 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ACTN1P12814 AC003985.2-201ENST00000562268 1669 ntBASIC5.65□□□□□ -1.51
ACTN1P12814 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.65□□□□□ -1.51
ACTN1P12814 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
ACTN1P12814 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.65□□□□□ -1.51
ACTN1P12814 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ACTN1P12814 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ACTN1P12814 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
ACTN1P12814 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN1P12814 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN1P12814 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN1P12814 AC006210.2-201ENST00000367074 1545 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
ACTN1P12814 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN1P12814 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN1P12814 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN1P12814 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN1P12814 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ACTN1P12814 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN1P12814 RNA5SP505-201ENST00000364748 108 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 ST13P16-201ENST00000401760 781 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 SNORA11-201ENST00000408789 128 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.64□□□□□ -1.51
ACTN1P12814 AC009480.2-201ENST00000422916 432 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 AC046176.1-201ENST00000435260 1170 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 ARL5AP3-201ENST00000439327 386 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 RAB28P3-201ENST00000448325 597 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 AP002345.1-201ENST00000456493 928 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 AC006427.1-201ENST00000514359 712 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 AC067904.2-201ENST00000517322 1283 ntBASIC5.64□□□□□ -1.51
ACTN1P12814 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.64□□□□□ -1.51
ACTN1P12814 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN1P12814 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN1P12814 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN1P12814 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
ACTN1P12814 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.64□□□□□ -1.51
ACTN1P12814 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.64□□□□□ -1.51
ACTN1P12814 MEMO1P5-201ENST00000604810 406 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms