Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SCN2BO60939 RNU1-106P-201ENST00000384382 164 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 SNORA70-201ENST00000384436 135 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SCN2BO60939 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN2BO60939 FABP7P1-201ENST00000424004 391 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 RPS27P18-201ENST00000431701 247 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AL451139.1-201ENST00000434718 346 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN2BO60939 HMGB3P9-201ENST00000441799 583 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AL137845.2-201ENST00000444292 988 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN2BO60939 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN2BO60939 TCP11X3P-202ENST00000514289 1254 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.56□□□□□ -1.68
SCN2BO60939 RN7SKP66-201ENST00000516681 231 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 HMGB1P19-201ENST00000517578 577 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.56□□□□□ -1.68
SCN2BO60939 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN2BO60939 AP000919.1-201ENST00000582850 985 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.56□□□□□ -1.68
SCN2BO60939 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN2BO60939 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 MIR6886-201ENST00000619864 61 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AC019206.1-201ENST00000621938 425 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 AC012414.7-202ENST00000622705 1090 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SCN2BO60939 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
SCN2BO60939 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SCN2BO60939 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCN2BO60939 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN2BO60939 GJA6P-201ENST00000415117 1042 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN2BO60939 AC092570.3-201ENST00000420113 693 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN2BO60939 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 AC093414.1-201ENST00000434712 514 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN2BO60939 RPS26P2-201ENST00000440331 348 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN2BO60939 ARL4AP3-201ENST00000441452 574 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 VN1R96P-201ENST00000446052 858 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC099063.2-201ENST00000446360 662 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 OTX2P1-201ENST00000450956 354 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN2BO60939 RPS26P39-201ENST00000469206 341 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC074386.1-201ENST00000476560 767 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SCN2BO60939 RN7SL319P-201ENST00000480656 221 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC116562.1-201ENST00000485355 781 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 UBA52P3-201ENST00000491303 382 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN2BO60939 RNA5SP34-201ENST00000516887 130 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SCN2BO60939 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN2BO60939 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC022832.1-201ENST00000530718 645 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC092490.3-201ENST00000545370 572 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 HAUS8P1-201ENST00000549005 542 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.55□□□□□ -1.68
SCN2BO60939 AC079075.1-201ENST00000559543 878 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.55□□□□□ -1.68
SCN2BO60939 AC006116.3-201ENST00000592968 361 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC133552.5-201ENST00000604266 540 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AL121932.1-201ENST00000605542 214 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC007497.1-201ENST00000610421 561 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AL121612.2-201ENST00000612261 482 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AC015908.5-201ENST00000623289 343 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 CR381572.2-201ENST00000624852 397 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 A2MP1-204ENST00000566278 4130 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 AL590763.1-201ENST00000398297 1545 ntBASIC4.55□□□□□ -1.68
SCN2BO60939 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN2BO60939 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN2BO60939 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 AL672167.1-205ENST00000641112 3080 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 TLK1P1-201ENST00000456760 2440 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 Z97832.1-201ENST00000402490 328 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.54□□□□□ -1.68
SCN2BO60939 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC073136.2-201ENST00000417282 849 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 LINC00993-201ENST00000420453 540 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms