Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.66□□□□□ -1.66
HCN1O60741 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.66□□□□□ -1.66
HCN1O60741 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.66□□□□□ -1.66
HCN1O60741 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN1O60741 NDUFB4P11-201ENST00000560510 395 ntBASIC4.66□□□□□ -1.66
HCN1O60741 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.66□□□□□ -1.66
HCN1O60741 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN1O60741 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.66□□□□□ -1.66
HCN1O60741 SNORD91B-202ENST00000608459 222 ntBASIC4.66□□□□□ -1.66
HCN1O60741 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 AC004241.3-201ENST00000611728 517 ntBASIC4.66□□□□□ -1.66
HCN1O60741 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HCN1O60741 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HCN1O60741 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN1O60741 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
HCN1O60741 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HCN1O60741 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HCN1O60741 INTS6P1-201ENST00000504674 2530 ntBASIC4.66□□□□□ -1.66
HCN1O60741 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
HCN1O60741 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HCN1O60741 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
HCN1O60741 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.65□□□□□ -1.66
HCN1O60741 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HCN1O60741 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HCN1O60741 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HCN1O60741 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HCN1O60741 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.65□□□□□ -1.67
HCN1O60741 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.65□□□□□ -1.67
HCN1O60741 AL512430.2-201ENST00000406786 339 ntBASIC4.65□□□□□ -1.67
HCN1O60741 RN7SKP199-201ENST00000410325 305 ntBASIC4.65□□□□□ -1.67
HCN1O60741 RN7SKP114-201ENST00000410327 279 ntBASIC4.65□□□□□ -1.67
HCN1O60741 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.65□□□□□ -1.67
HCN1O60741 EIF4A1P1-201ENST00000420241 934 ntBASIC4.65□□□□□ -1.67
HCN1O60741 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.65□□□□□ -1.67
HCN1O60741 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 TMX2P1-201ENST00000436507 708 ntBASIC4.65□□□□□ -1.67
HCN1O60741 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.65□□□□□ -1.67
HCN1O60741 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 RPL10P17-201ENST00000453852 316 ntBASIC4.65□□□□□ -1.67
HCN1O60741 AC093166.2-201ENST00000455969 1017 ntBASIC4.65□□□□□ -1.67
HCN1O60741 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.65□□□□□ -1.67
HCN1O60741 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 snoU109.6-201ENST00000516831 118 ntBASIC4.65□□□□□ -1.67
HCN1O60741 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.65□□□□□ -1.67
HCN1O60741 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HCN1O60741 OR1F2P-201ENST00000570470 933 ntBASIC4.65□□□□□ -1.67
HCN1O60741 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.65□□□□□ -1.67
HCN1O60741 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
HCN1O60741 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HCN1O60741 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HCN1O60741 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HCN1O60741 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.65□□□□□ -1.67
HCN1O60741 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN1O60741 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCN1O60741 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HCN1O60741 AP001273.1-201ENST00000624493 3152 ntBASIC4.64□□□□□ -1.67
HCN1O60741 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN1O60741 RN7SKP113-201ENST00000363891 295 ntBASIC4.64□□□□□ -1.67
HCN1O60741 AL139128.1-201ENST00000413921 941 ntBASIC4.64□□□□□ -1.67
HCN1O60741 GJA6P-201ENST00000415117 1042 ntBASIC4.64□□□□□ -1.67
HCN1O60741 RAB9AP4-201ENST00000415230 609 ntBASIC4.64□□□□□ -1.67
HCN1O60741 RBMY2KP-201ENST00000418221 992 ntBASIC4.64□□□□□ -1.67
HCN1O60741 RPS26P13-201ENST00000419030 330 ntBASIC4.64□□□□□ -1.67
HCN1O60741 AL590609.2-201ENST00000421430 368 ntBASIC4.64□□□□□ -1.67
HCN1O60741 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.64□□□□□ -1.67
HCN1O60741 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.64□□□□□ -1.67
HCN1O60741 PTMAP3-201ENST00000447474 330 ntBASIC4.64□□□□□ -1.67
HCN1O60741 AL445433.1-201ENST00000457507 257 ntBASIC4.64□□□□□ -1.67
HCN1O60741 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.64□□□□□ -1.67
HCN1O60741 AC022795.1-201ENST00000473808 480 ntBASIC4.64□□□□□ -1.67
HCN1O60741 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.64□□□□□ -1.67
HCN1O60741 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCN1O60741 RNA5SP228-201ENST00000516232 133 ntBASIC4.64□□□□□ -1.67
HCN1O60741 HMGB1P19-201ENST00000517578 577 ntBASIC4.64□□□□□ -1.67
HCN1O60741 OR5AZ1P-201ENST00000527448 943 ntBASIC4.64□□□□□ -1.67
HCN1O60741 OR7E128P-201ENST00000532736 1024 ntBASIC4.64□□□□□ -1.67
HCN1O60741 AGGF1P9-201ENST00000561884 913 ntBASIC4.64□□□□□ -1.67
HCN1O60741 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.64□□□□□ -1.67
HCN1O60741 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms