Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CKS1BP1-201ENST00000555221 240 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AC079075.1-201ENST00000559543 878 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC188H7C350 LINC00557-201ENST00000563184 1279 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC040174.2-201ENST00000602701 465 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 MTCO3P22-201ENST00000603219 784 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC188H7C350 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC006453.5-201ENST00000636451 619 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC188H7C350 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC188H7C350 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC188H7C350 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC108075.1-201ENST00000424692 529 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 ARL4AP3-201ENST00000441452 574 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 Z80107.2-201ENST00000445127 392 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 RPS26P41-201ENST00000450370 284 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 PSMC1P13-201ENST00000458195 985 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC116562.1-201ENST00000485355 781 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 RN7SL547P-201ENST00000490793 290 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AC010350.1-201ENST00000504908 231 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 TCP11X3P-202ENST00000514289 1254 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 CD24P2-201ENST00000565486 219 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC005242.1-201ENST00000585658 438 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC104695.2-201ENST00000605056 775 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 AC234782.5-201ENST00000617723 324 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AC119674.1-212ENST00000641155 993 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC188H7C350 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC188H7C350 AP001273.1-201ENST00000624493 3152 ntBASIC5.13□□□□□ -1.59
CCDC188H7C350 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC188H7C350 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
CCDC188H7C350 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC188H7C350 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
CCDC188H7C350 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC188H7C350 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC188H7C350 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC188H7C350 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC188H7C350 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AC093775.1-201ENST00000624154 1868 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 CASC19-284ENST00000642142 1868 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC188H7C350 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC188H7C350 VN1R37P-201ENST00000419096 748 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 E2F6P2-201ENST00000420708 748 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC188H7C350 MTND4P24-201ENST00000424002 397 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC188H7C350 RPL23AP19-201ENST00000436229 369 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AC004938.1-201ENST00000438468 308 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC188H7C350 NPM1P33-201ENST00000438918 872 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AC006326.1-201ENST00000445465 787 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 HMGN1P36-201ENST00000446623 298 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AL035551.1-201ENST00000446931 348 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 KNOP1P3-201ENST00000446933 426 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 OR2AF1P-201ENST00000454899 889 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC084754.1-201ENST00000463466 464 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 RPL7AP10-201ENST00000481016 791 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC093663.2-201ENST00000484625 313 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 RPS21P4-201ENST00000487122 248 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms