Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC133555.2-201ENST00000550213 292 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC098935.2-201ENST00000604222 466 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC104687.2-201ENST00000604442 342 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC010424.2-201ENST00000607594 443 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 MIR6853-201ENST00000619642 74 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 TRIM51GP-201ENST00000534741 1350 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC008758.3-201ENST00000507003 1829 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 AC104260.2-201ENST00000623551 3497 ntBASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD8-MDP1E9PL57 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC068446.1-201ENST00000556425 1549 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 SAMMSON-213ENST00000641336 1521 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AL590240.1-201ENST00000334118 313 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 MIR141-201ENST00000384975 95 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AL607077.1-201ENST00000401718 499 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 RNA5SP345-201ENST00000410646 108 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 RSU1P3-201ENST00000412878 835 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 QRSL1P2-201ENST00000418582 964 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC138409.2-202ENST00000507274 458 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AL049874.4-201ENST00000557593 255 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 ELOCP28-201ENST00000590044 317 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 AC008745.1-201ENST00000604064 271 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 SOCS5P3-201ENST00000425115 1576 ntBASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD8-MDP1E9PL57 MFSD8-216ENST00000641147 4009 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 NPM1P10-201ENST00000398310 865 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AC013429.2-201ENST00000418798 781 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 RCC2P2-201ENST00000422174 918 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 RPS5P7-201ENST00000456664 608 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AC096741.1-201ENST00000472250 846 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 RN7SL860P-201ENST00000473738 223 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 RPL12P20-201ENST00000475538 479 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 RPL5P22-201ENST00000480199 884 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AC069304.1-201ENST00000491593 704 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 AL049874.2-201ENST00000492636 288 ntBASIC4.97□□□□□ -1.61
NEDD8-MDP1E9PL57 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms