Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC010627.1-201ENST00000503819 1294 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 RN7SKP141-201ENST00000516167 338 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 RNA5SP92-201ENST00000516437 110 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 SNORA31.13-201ENST00000516624 135 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 SNORA43.3-201ENST00000517240 103 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 CDH12P4-201ENST00000517835 295 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 CDH12P3-201ENST00000517935 295 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 CDH12P1-201ENST00000518435 295 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 MORF4L1P3-201ENST00000525966 950 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC023538.1-201ENST00000534576 736 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 CYB5AP5-201ENST00000549779 389 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC006530.1-201ENST00000555980 571 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 MIR4260-201ENST00000583107 67 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 ZNF849P-201ENST00000594711 1566 ntBASIC5.41□□□□□ -1.54
VPS4AQ9UN37 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4AQ9UN37 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MFSD8-220ENST00000641243 1422 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC068870.1-201ENST00000563737 2455 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MIR130A-201ENST00000385274 89 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 RN7SKP29-201ENST00000410957 272 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 UBE2V1P11-201ENST00000411559 285 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 LIPT1P1-201ENST00000415870 1186 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 HIGD1AP15-201ENST00000416198 280 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AL662874.1-201ENST00000426065 230 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC092634.2-201ENST00000428146 1010 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 ETF1P3-201ENST00000430422 1160 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MTCO2P20-201ENST00000437339 673 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 ARAFP2-201ENST00000440565 559 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MTATP6P26-201ENST00000445926 662 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 GTF2IP12-201ENST00000456547 356 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC093166.4-201ENST00000457867 318 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 COPS8P2-201ENST00000473228 627 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC134050.1-201ENST00000495088 933 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MTCYBP35-201ENST00000503630 1137 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC093534.1-201ENST00000504977 132 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC113420.1-201ENST00000507903 571 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 RNU6-311P-201ENST00000516224 102 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 OR8I1P-201ENST00000529291 931 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 HIGD1AP5-201ENST00000529959 259 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC087888.1-201ENST00000550884 1254 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AL049870.4-201ENST00000555741 486 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MTCYBP23-201ENST00000558717 1102 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 IMMP1LP3-201ENST00000604197 224 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC073387.2-201ENST00000604797 784 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC024060.1-201ENST00000607052 494 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 OR2BH1P-201ENST00000608850 864 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 RPSAP73-201ENST00000614820 330 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC007786.3-201ENST00000615154 596 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 RN7SL544P-201ENST00000617232 284 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 MIR6837-201ENST00000620884 64 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 RN7SL763P-201ENST00000620922 284 ntBASIC5.4□□□□□ -1.54
VPS4AQ9UN37 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS4AQ9UN37 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
VPS4AQ9UN37 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS4AQ9UN37 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
VPS4AQ9UN37 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS4AQ9UN37 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS4AQ9UN37 AC235565.1-201ENST00000456962 1325 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms