Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 OR11I1P-201ENST00000486033 954 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC006349.1-201ENST00000555526 235 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AL121839.1-201ENST00000556233 1185 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AL390334.1-201ENST00000556395 450 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AP005262.1-201ENST00000582646 997 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC068790.7-201ENST00000602347 528 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 OR7M1P-201ENST00000608946 533 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 MIR6780A-201ENST00000615089 68 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 BNIP3P41-202ENST00000616656 861 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 MTND5P23-201ENST00000430812 1655 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC245100.2-201ENST00000454544 1679 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLCF1Q9UBD9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
CLCF1Q9UBD9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CLCF1Q9UBD9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLCF1Q9UBD9 AC104623.2-202ENST00000623477 4002 ntBASIC4.34□□□□□ -1.72
CLCF1Q9UBD9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CLCF1Q9UBD9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 MFSD8-216ENST00000641147 4009 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RN7SKP74-201ENST00000362849 309 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RNU6-697P-201ENST00000363348 107 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RNU2-50P-201ENST00000410494 143 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RNA5SP296-201ENST00000410523 111 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RN7SKP216-201ENST00000411050 312 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 NPM1P40-201ENST00000412758 733 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RSU1P3-201ENST00000412878 835 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 QRSL1P2-201ENST00000418582 964 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 H2AFZP6-201ENST00000444403 394 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC073264.2-201ENST00000448886 166 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RPS5P7-201ENST00000456664 608 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RPS29P33-201ENST00000456717 146 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RN7SL517P-201ENST00000462240 305 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 HMGN1P8-201ENST00000463578 288 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 SCARNA22-201ENST00000503991 125 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 RN7SKP276-201ENST00000516242 268 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC026688.1-201ENST00000520639 1168 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 BUD31P1-201ENST00000521828 359 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 SOX5P1-201ENST00000524155 1127 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 BNIP3P1-201ENST00000547295 580 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 LSM3P2-201ENST00000551246 273 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 EIF1AXP2-201ENST00000555940 413 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AL122125.1-201ENST00000616999 600 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AL022401.1-201ENST00000619498 108 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 MIR7703-201ENST00000620784 77 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC002044.3-201ENST00000623314 541 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC092376.2-201ENST00000622621 4116 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 AC063976.2-201ENST00000425667 3556 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 CDC27P2-201ENST00000425026 1922 ntBASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCF1Q9UBD9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC011447.7-201ENST00000624228 1590 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms