Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 U3.35-201ENST00000408405 208 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 RN7SKP159-201ENST00000410657 292 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AL356276.2-201ENST00000435919 558 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AL592156.1-201ENST00000508758 304 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 PRPF19P1-201ENST00000584766 898 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AC093388.1-201ENST00000609166 430 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 SNRPFP1-201ENST00000414761 252 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 FTH1P25-201ENST00000447665 469 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AC096577.2-201ENST00000611455 153 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 AC007998.4-201ENST00000612496 2533 ntBASIC4.69□□□□□ -1.66
CHD7Q9P2D1 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD7Q9P2D1 DOCK11P1-201ENST00000553480 5932 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 RPL35P6-201ENST00000490024 372 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 MIR3944-201ENST00000581277 108 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AL161729.3-201ENST00000603533 673 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 PTMAP5-201ENST00000393073 333 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC097374.1-203ENST00000400783 485 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AL158827.1-201ENST00000416300 391 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC009093.8-201ENST00000641769 292 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 RPL21P67-201ENST00000402896 478 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 HSFY1P1-201ENST00000423928 1178 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 TBCAP1-201ENST00000436520 327 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 OR4A6P-201ENST00000534364 970 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC107016.1-201ENST00000550463 337 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC106782.4-201ENST00000568264 210 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 VN1R92P-201ENST00000598511 928 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC023762.1-201ENST00000603280 584 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 AC015908.5-201ENST00000623289 343 ntBASIC4.68□□□□□ -1.66
CHD7Q9P2D1 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AC007967.1-201ENST00000455422 1159 ntBASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms