Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 Z74021.1-201ENST00000423610 407 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC073264.2-201ENST00000448886 166 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AL935212.3-201ENST00000450729 284 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AL513533.1-201ENST00000453728 415 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AL445433.1-201ENST00000457507 257 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 GOLGA5P1-201ENST00000507317 980 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 RN7SKP46-201ENST00000515942 234 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AP006289.1-201ENST00000538089 277 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC125612.1-201ENST00000547580 377 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 MIR3936-201ENST00000584304 110 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 BNIP3P32-201ENST00000600015 554 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AL133338.2-201ENST00000604292 736 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC097461.1-201ENST00000568928 2821 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 SNORA70F-201ENST00000384142 135 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 MIR1271-201ENST00000408537 86 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 TRGV5P-201ENST00000419915 354 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC117434.1-201ENST00000419971 836 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 RPL23AP37-201ENST00000479658 549 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 NPM1P21-201ENST00000513394 762 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC087283.1-201ENST00000604029 1074 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC234782.5-201ENST00000617723 324 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC022106.2-201ENST00000620114 757 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 MIR7703-201ENST00000620784 77 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 AC108751.5-201ENST00000492880 1336 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.91□□□□□ -1.62
CISHQ9NSE2 OR14L1P-202ENST00000641545 3009 ntBASIC4.91□□□□□ -1.62
CISHQ9NSE2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CISHQ9NSE2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CISHQ9NSE2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
CISHQ9NSE2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.9□□□□□ -1.62
CISHQ9NSE2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
CISHQ9NSE2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CISHQ9NSE2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CISHQ9NSE2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.9□□□□□ -1.62
CISHQ9NSE2 AC079741.1-201ENST00000321498 212 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CISHQ9NSE2 SNORD113.2-201ENST00000364166 89 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 MIR937-201ENST00000401271 86 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 YWHAZP2-201ENST00000440317 728 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CISHQ9NSE2 RN7SL354P-201ENST00000469282 294 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 RPS4XP18-201ENST00000495480 763 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 AK4P6-201ENST00000505168 528 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 AC063949.1-201ENST00000552900 865 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 AC008536.1-201ENST00000602872 669 ntBASIC4.9□□□□□ -1.63
CISHQ9NSE2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CISHQ9NSE2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CISHQ9NSE2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CISHQ9NSE2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.9□□□□□ -1.63
CISHQ9NSE2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CISHQ9NSE2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CISHQ9NSE2 AC073429.2-201ENST00000569694 1444 ntBASIC4.89□□□□□ -1.63
CISHQ9NSE2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CISHQ9NSE2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CISHQ9NSE2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms