Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPS24P16-201ENST00000497294 392 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 BGLT3-201ENST00000564523 994 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 SNX6P1-201ENST00000601728 1224 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC105254.2-201ENST00000603636 436 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 BX005019.1-201ENST00000561881 1810 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC110792.3-201ENST00000595906 1614 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 Z97832.1-201ENST00000402490 328 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 PCNPP4-201ENST00000414817 517 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 TMX2P1-201ENST00000436507 708 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AL138878.2-201ENST00000440581 1241 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 RN7SL189P-201ENST00000468631 289 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AC022360.1-201ENST00000521058 340 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AC008147.3-201ENST00000548666 354 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 MIR4270-201ENST00000581799 70 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AF230666.2-201ENST00000602328 725 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TM9SF3Q9HD45 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC000374.1-201ENST00000434698 1745 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 HSPD1P11-201ENST00000508643 1702 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 RN7SKP153-201ENST00000365026 316 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC093719.1-202ENST00000392735 373 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 OR5M12P-201ENST00000423388 929 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 UBE2V2P1-201ENST00000434717 398 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC011753.3-201ENST00000443436 406 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AL137845.2-201ENST00000444292 988 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AP000942.1-201ENST00000463969 747 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC063943.1-201ENST00000465434 453 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 RPL7P41-201ENST00000485823 957 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 RNA5SP43-201ENST00000516559 110 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC100784.1-201ENST00000522790 310 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 GCSHP4-201ENST00000538792 439 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 NMNAT1P1-201ENST00000554095 876 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC010615.3-201ENST00000597319 394 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AC234771.5-201ENST00000600161 514 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AL133406.3-201ENST00000606817 541 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms