Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AP000473.2-201ENST00000602659 1537 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC019072.1-201ENST00000604535 1551 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC092648.1-201ENST00000425870 423 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC092170.1-201ENST00000440211 356 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.03□□□□□ -1.44
HPS3Q969F9 MRPL35P2-201ENST00000448009 511 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 AC092155.2-201ENST00000454675 477 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 AC068587.2-201ENST00000478386 781 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC109464.1-201ENST00000511091 819 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 NDUFS5P6-201ENST00000529136 295 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.03□□□□□ -1.44
HPS3Q969F9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC027104.1-201ENST00000563702 681 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 ATP5F1P7-201ENST00000567330 760 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC022022.2-201ENST00000602989 360 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 AL365400.2-201ENST00000605604 902 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 AC126175.1-201ENST00000617041 758 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC006963.1-201ENST00000624003 1052 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.03□□□□□ -1.44
HPS3Q969F9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.03□□□□□ -1.44
HPS3Q969F9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HPS3Q969F9 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 VPS35P1-201ENST00000563400 1518 ntBASIC6.03□□□□□ -1.44
HPS3Q969F9 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HPS3Q969F9 AC133552.1-201ENST00000569988 4007 ntBASIC6.02□□□□□ -1.44
HPS3Q969F9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HPS3Q969F9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 SEC63P2-201ENST00000503863 1939 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HPS3Q969F9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 AL035419.1-201ENST00000397037 564 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AP002530.1-201ENST00000405705 684 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 RN7SKP286-201ENST00000410894 299 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 HIGD1AP15-201ENST00000416198 280 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 MTND4P3-201ENST00000417829 541 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC092447.3-201ENST00000426027 686 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 RPS27AP6-201ENST00000427962 448 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 NPM1P18-201ENST00000434232 732 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 CYCSP11-201ENST00000436426 315 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC245047.2-201ENST00000441060 530 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 VN1R25P-201ENST00000443385 738 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AL139824.2-201ENST00000458731 1095 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms