Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AL121834.1-201ENST00000572284 509 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 RNA5SP130-201ENST00000364431 114 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 SETP9-201ENST00000423837 832 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC068993.1-201ENST00000546724 589 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 SOCS5P3-201ENST00000425115 1576 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 RPS27AP11-201ENST00000402798 447 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC012409.3-201ENST00000611343 981 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 OR2L1P-202ENST00000641567 1023 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC010401.2-201ENST00000575137 4934 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 THAP12P5-201ENST00000405864 2275 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC108467.2-201ENST00000617640 1597 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 SNORA62.3-201ENST00000365110 153 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 RNA5SP372-201ENST00000390836 115 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 VTI1BP4-201ENST00000427516 527 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 YY1P1-201ENST00000427625 668 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 RPL12P18-201ENST00000437175 325 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 RN7SL691P-201ENST00000494487 301 ntBASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.15□□□□□ -1.9
ALMS1Q8TCU4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC025031.4-201ENST00000621248 3271 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 RN7SKP185-201ENST00000362813 326 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 OR1L6-202ENST00000373684 1044 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 RPL12P9-201ENST00000412942 488 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC006499.6-201ENST00000511169 607 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms