Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC025574.1-201ENST00000554784 1653 ntBASIC3.98□□□□□ -1.77
CCDC168Q8NDH2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC168Q8NDH2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC168Q8NDH2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC168Q8NDH2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC120036.2-201ENST00000509729 1474 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 RNU1-82P-201ENST00000390851 165 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AL590762.2-201ENST00000395798 571 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 snoU13.29-201ENST00000459370 104 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC119751.5-201ENST00000514077 770 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 BRD7P6-201ENST00000431406 1860 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AP000866.6-201ENST00000638898 3579 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 HSPD1P8-201ENST00000400121 1658 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC034229.2-201ENST00000566945 2508 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 OR13Z1P-201ENST00000416141 834 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AL356387.2-201ENST00000422272 243 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 MTND4LP31-201ENST00000514859 294 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC093014.1-201ENST00000548926 724 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC022726.1-201ENST00000587475 207 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC010424.2-201ENST00000607594 443 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 AC015712.7-201ENST00000615211 635 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 MIR8059-201ENST00000620427 81 ntBASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC168Q8NDH2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 STX3-208ENST00000641815 3236 ntBASIC3.96□□□□□ -1.77
CCDC168Q8NDH2 TLK1P1-201ENST00000456760 2440 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 RNA5SP119-201ENST00000362715 117 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 MIR449B-201ENST00000384995 97 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 OR51B3P-201ENST00000412287 913 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC097523.2-201ENST00000435551 652 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC006116.5-201ENST00000591936 559 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AL136164.3-201ENST00000624429 3978 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 RN7SKP177-201ENST00000410567 355 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC009238.2-201ENST00000431026 355 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 RPL7AP61-201ENST00000443410 636 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC053481.4-201ENST00000583164 216 ntBASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 uc_338.7-201ENST00000621834 124 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms