Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AP001429.1-201ENST00000602568 530 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AP000942.4-201ENST00000604811 241 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AL136985.2-201ENST00000607372 535 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC134981.1-201ENST00000628076 348 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 GOT2P1-201ENST00000440922 1309 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 AC005034.3-201ENST00000604845 1747 ntBASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
DEPDC4Q8N2C3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC011933.2-201ENST00000578539 2790 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC245036.1-201ENST00000391727 309 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RPL5P35-201ENST00000398869 816 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AL391419.1-201ENST00000398901 1275 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 MIR1204-201ENST00000408388 67 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RPL35AP24-201ENST00000413846 330 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CRIP1P3-201ENST00000416794 220 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC013429.2-201ENST00000418798 781 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 KCTD9P3-201ENST00000434597 1169 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RPL23AP74-201ENST00000437246 471 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 HMGB3P9-201ENST00000441799 583 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 MTCYBP6-201ENST00000441810 138 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 FAM103A2P-201ENST00000444122 354 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CBWD4P-201ENST00000445695 655 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RPS29P5-201ENST00000452777 171 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AL133244.1-201ENST00000456007 258 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC005229.2-201ENST00000456995 399 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC005550.2-201ENST00000476382 318 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RN7SL124P-201ENST00000498656 285 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC113352.1-201ENST00000513196 666 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 RN7SKP96-201ENST00000516948 297 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC022690.1-201ENST00000526681 550 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 SAA3P-201ENST00000533267 365 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC243972.3-201ENST00000539655 198 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 CHCHD3P2-201ENST00000550751 639 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC034105.3-201ENST00000565294 442 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 IGLJCOR18-201ENST00000584002 424 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AC027243.2-201ENST00000602530 724 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AL953862.2-201ENST00000603089 820 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
DEPDC4Q8N2C3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms