Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 MIR4270-201ENST00000581799 70 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC002069.2-201ENST00000603580 883 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AL031320.1-201ENST00000604177 357 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC095038.2-201ENST00000621464 1070 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC010872.1-201ENST00000624225 675 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 OR4F13P-202ENST00000560066 2054 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 IRF5P1-201ENST00000504852 2164 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC068870.3-201ENST00000625077 2536 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RN7SKP95-201ENST00000362860 303 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RNA5SP455-201ENST00000365190 119 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 NUDT19P3-201ENST00000404698 555 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 DDX39BP1-205ENST00000422507 192 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 MGAT2P2-201ENST00000427194 797 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 FTLP19-201ENST00000433300 394 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC099670.2-201ENST00000435130 321 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RNF2P1-201ENST00000442955 1010 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 HMGB1P5-202ENST00000451497 985 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RN7SL385P-201ENST00000468873 276 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC107398.1-201ENST00000486904 505 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 OR7H2P-201ENST00000513483 306 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 HIGD1AP18-201ENST00000520730 278 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 CIR1P1-201ENST00000524055 1133 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC209154.1-201ENST00000582156 337 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 MIR4691-201ENST00000583764 85 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 LSM1P2-201ENST00000604911 322 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AL391834.1-201ENST00000609609 560 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC016957.2-201ENST00000616998 848 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 MTCO1P15-201ENST00000529569 1526 ntBASIC5.73□□□□□ -1.49
HERC6Q8IVU3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HERC6Q8IVU3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 SNORA62-201ENST00000365493 153 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AL355143.1-201ENST00000407101 841 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 RNU4-27P-201ENST00000410889 139 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 NPM1P40-201ENST00000412758 733 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC105402.1-201ENST00000413336 545 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 CHEK2P3-201ENST00000416118 248 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC019050.1-201ENST00000418508 492 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AL512661.1-201ENST00000434586 1253 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms