Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TBCAP1-201ENST00000436520 327 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 RPL7P15-201ENST00000461190 712 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AP001804.2-201ENST00000533932 910 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 MIR3944-201ENST00000581277 108 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AL033543.1-201ENST00000623440 13454 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 AC008549.2-201ENST00000333482 706 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 PTMAP2-201ENST00000397627 327 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 ISCUP1-201ENST00000454451 448 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 AC100778.3-201ENST00000580060 1750 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL355596.1-201ENST00000565399 3996 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL590704.1-201ENST00000402856 794 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL035246.1-201ENST00000433554 1255 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AC090018.1-201ENST00000434369 367 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AC004980.3-201ENST00000447046 365 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 RNA5SP519-201ENST00000516480 119 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 Y_RNA.719-201ENST00000517156 106 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 OR5D2P-201ENST00000524390 911 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AC007179.3-201ENST00000604976 235 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL352984.2-202ENST00000613699 155 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL596275.2-208ENST00000641192 594 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL355852.1-201ENST00000454081 1771 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 HNRNPA1P54-201ENST00000411857 9714 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 SYF2P2-201ENST00000417620 583 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 KRR1P1-201ENST00000419430 803 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL451139.1-201ENST00000434718 346 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 RNA5SP73-201ENST00000516744 108 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 IPO5P1-202ENST00000600039 287 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 AL445363.3-201ENST00000623080 671 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 TET1P1-201ENST00000426627 2301 ntBASIC3.66□□□□□ -1.82
VPS13CQ709C8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
VPS13CQ709C8 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS13CQ709C8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 AC104164.2-201ENST00000496953 495 ntBASIC3.65□□□□□ -1.82
VPS13CQ709C8 MIR2116-201ENST00000517221 80 ntBASIC3.65□□□□□ -1.82
VPS13CQ709C8 AC093014.1-201ENST00000548926 724 ntBASIC3.65□□□□□ -1.82
VPS13CQ709C8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 uc_338.13-201ENST00000618243 179 ntBASIC3.65□□□□□ -1.82
VPS13CQ709C8 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 RPL6P29-201ENST00000414863 865 ntBASIC3.65□□□□□ -1.82
VPS13CQ709C8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS13CQ709C8 AC007991.1-201ENST00000522680 631 ntBASIC3.65□□□□□ -1.82
VPS13CQ709C8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.65□□□□□ -1.82
VPS13CQ709C8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS13CQ709C8 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS13CQ709C8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms