Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 AC017002.4-201ENST00000604721 1525 ntBASIC4.12□□□□□ -1.75
USF2Q15853 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USF2Q15853 RNA5SP239-201ENST00000410218 129 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 TNPO1P1-201ENST00000423641 1138 ntBASIC4.12□□□□□ -1.75
USF2Q15853 SRSF1P1-201ENST00000424058 520 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.12□□□□□ -1.75
USF2Q15853 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.12□□□□□ -1.75
USF2Q15853 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.12□□□□□ -1.75
USF2Q15853 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.12□□□□□ -1.75
USF2Q15853 AC010683.1-201ENST00000473673 378 ntBASIC4.12□□□□□ -1.75
USF2Q15853 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.12□□□□□ -1.75
USF2Q15853 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 STMN1P2-201ENST00000508435 439 ntBASIC4.12□□□□□ -1.75
USF2Q15853 HMGB1P44-201ENST00000508597 572 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.12□□□□□ -1.75
USF2Q15853 AC018797.3-201ENST00000513388 1241 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 SNORD46.2-201ENST00000516021 102 ntBASIC4.12□□□□□ -1.75
USF2Q15853 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 AC022360.1-201ENST00000521058 340 ntBASIC4.12□□□□□ -1.75
USF2Q15853 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.12□□□□□ -1.75
USF2Q15853 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.12□□□□□ -1.75
USF2Q15853 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.12□□□□□ -1.75
USF2Q15853 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.12□□□□□ -1.75
USF2Q15853 AC026979.4-201ENST00000606555 645 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AC097505.1-201ENST00000610199 565 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
USF2Q15853 uc_338.9-201ENST00000617424 182 ntBASIC4.12□□□□□ -1.75
USF2Q15853 MIR6839-201ENST00000620425 113 ntBASIC4.12□□□□□ -1.75
USF2Q15853 AL356121.2-201ENST00000624715 780 ntBASIC4.12□□□□□ -1.75
USF2Q15853 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.12□□□□□ -1.75
USF2Q15853 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
USF2Q15853 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.12□□□□□ -1.75
USF2Q15853 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.12□□□□□ -1.75
USF2Q15853 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF2Q15853 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 AL031119.1-201ENST00000404707 1879 ntBASIC4.11□□□□□ -1.75
USF2Q15853 AC009951.1-201ENST00000623674 2614 ntBASIC4.11□□□□□ -1.75
USF2Q15853 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
USF2Q15853 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 PNPT1P2-201ENST00000456768 2050 ntBASIC4.11□□□□□ -1.75
USF2Q15853 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 RN7SKP269-201ENST00000365545 319 ntBASIC4.11□□□□□ -1.75
USF2Q15853 RNA5SP284-201ENST00000384547 118 ntBASIC4.11□□□□□ -1.75
USF2Q15853 MIR323B-201ENST00000385269 82 ntBASIC4.11□□□□□ -1.75
USF2Q15853 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.11□□□□□ -1.75
USF2Q15853 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 AC002504.1-201ENST00000438281 691 ntBASIC4.11□□□□□ -1.75
USF2Q15853 AC105399.1-202ENST00000447303 205 ntBASIC4.11□□□□□ -1.75
USF2Q15853 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.11□□□□□ -1.75
USF2Q15853 PSMC1P13-201ENST00000458195 985 ntBASIC4.11□□□□□ -1.75
USF2Q15853 CBX1P5-201ENST00000475330 559 ntBASIC4.11□□□□□ -1.75
USF2Q15853 AC058823.1-201ENST00000485315 474 ntBASIC4.11□□□□□ -1.75
USF2Q15853 RPL7P51-201ENST00000490532 749 ntBASIC4.11□□□□□ -1.75
USF2Q15853 AC022133.1-201ENST00000490961 571 ntBASIC4.11□□□□□ -1.75
USF2Q15853 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.11□□□□□ -1.75
USF2Q15853 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.11□□□□□ -1.75
USF2Q15853 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
USF2Q15853 AC005341.1-201ENST00000571086 708 ntBASIC4.11□□□□□ -1.75
USF2Q15853 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.11□□□□□ -1.75
USF2Q15853 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.11□□□□□ -1.75
USF2Q15853 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.11□□□□□ -1.75
USF2Q15853 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 AL391834.1-201ENST00000609609 560 ntBASIC4.11□□□□□ -1.75
USF2Q15853 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.11□□□□□ -1.75
USF2Q15853 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
USF2Q15853 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
USF2Q15853 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
USF2Q15853 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF2Q15853 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms