Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.31□□□□□ -1.72
H3F3AP84243 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
H3F3AP84243 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 DHX9P1-201ENST00000436565 3076 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 TET1P1-201ENST00000426627 2301 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
H3F3AP84243 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3AP84243 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.3□□□□□ -1.72
H3F3AP84243 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3AP84243 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3AP84243 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
H3F3AP84243 MIR550A3-201ENST00000390735 95 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3AP84243 RNA5SP113-201ENST00000410486 84 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3AP84243 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.3□□□□□ -1.72
H3F3AP84243 RPL36AP10-201ENST00000421785 322 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 RGS17P1-201ENST00000423358 553 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 CKS1BP6-201ENST00000424932 240 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AL590762.4-201ENST00000425885 253 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AC006455.6-201ENST00000426192 893 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 LYPLA1P1-201ENST00000434514 622 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AL450263.2-201ENST00000439400 589 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AC073648.4-201ENST00000442655 781 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AL589765.3-201ENST00000446084 462 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AC098583.1-201ENST00000480875 255 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AC231760.1-201ENST00000498002 260 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.3□□□□□ -1.72
H3F3AP84243 AC093890.1-201ENST00000502554 540 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 SCARNA22-201ENST00000503991 125 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.3□□□□□ -1.72
H3F3AP84243 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.3□□□□□ -1.72
H3F3AP84243 BRD9P1-201ENST00000529855 560 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3AP84243 AC022882.1-201ENST00000532142 501 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
H3F3AP84243 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H3F3AP84243 AC233280.2-201ENST00000603917 1070 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AL391358.1-201ENST00000605342 190 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AF117829.2-201ENST00000619538 361 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 AL445528.2-201ENST00000620582 470 ntBASIC4.3□□□□□ -1.72
H3F3AP84243 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3AP84243 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H3F3AP84243 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3AP84243 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
H3F3AP84243 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H3F3AP84243 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3AP84243 AL606537.1-201ENST00000607258 2011 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 AC245100.2-201ENST00000454544 1679 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3AP84243 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 MAPK10-349ENST00000641767 3661 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H3F3AP84243 RNA5SP87-201ENST00000384155 118 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
H3F3AP84243 RN7SKP100-201ENST00000411258 284 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3AP84243 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3AP84243 GLUD1P9-201ENST00000420997 1173 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3AP84243 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3AP84243 NRBF2P3-201ENST00000432731 865 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 CYCSP11-201ENST00000436426 315 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 SNRPFP2-201ENST00000440710 251 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 MRPL48P1-201ENST00000445390 636 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 OTX2P1-201ENST00000450956 354 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.29□□□□□ -1.72
H3F3AP84243 RPS3AP53-201ENST00000454716 778 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3AP84243 ZFRP1-201ENST00000457579 2970 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC092324.1-201ENST00000468671 324 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC090686.1-201ENST00000481577 749 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC104971.1-201ENST00000495117 578 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3AP84243 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.29□□□□□ -1.72
H3F3AP84243 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3AP84243 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3AP84243 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3AP84243 MIR3934-201ENST00000579806 107 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 RN7SL52P-201ENST00000584271 284 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.29□□□□□ -1.72
H3F3AP84243 AC012414.7-202ENST00000622705 1090 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3AP84243 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3AP84243 CASC19-206ENST00000641028 1430 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 AC027228.2-201ENST00000567141 2154 ntBASIC4.29□□□□□ -1.72
H3F3AP84243 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3AP84243 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.28□□□□□ -1.72
H3F3AP84243 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H3F3AP84243 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3AP84243 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms