Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
AP1S1P61966 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
AP1S1P61966 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AP1S1P61966 MIR937-201ENST00000401271 86 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AL591848.1-201ENST00000413092 322 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S1P61966 E2F6P2-201ENST00000420708 748 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S1P61966 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S1P61966 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S1P61966 RHEBP2-201ENST00000450289 600 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC006967.1-201ENST00000467608 589 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC135999.1-201ENST00000478962 479 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC025164.1-201ENST00000496249 478 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S1P61966 OR7H2P-201ENST00000513483 306 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S1P61966 AL110118.1-201ENST00000553543 400 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S1P61966 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S1P61966 MIR4270-201ENST00000581799 70 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S1P61966 OR7A19P-201ENST00000608051 733 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC116651.1-201ENST00000609724 556 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 MIR6853-201ENST00000619642 74 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S1P61966 AC120338.1-201ENST00000625074 1541 ntBASIC4.8□□□□□ -1.64
AP1S1P61966 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S1P61966 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S1P61966 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AP1S1P61966 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S1P61966 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S1P61966 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AL590762.2-201ENST00000395798 571 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 MIR298-201ENST00000401212 88 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AP000580.1-201ENST00000404439 358 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 RN7SKP267-201ENST00000410381 285 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S1P61966 NMNAT1P2-201ENST00000435192 860 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AC004938.1-201ENST00000438468 308 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 H2AFZP5-201ENST00000446960 382 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AC079168.2-201ENST00000453977 416 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S1P61966 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S1P61966 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S1P61966 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 FKBP1BP1-201ENST00000553366 325 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S1P61966 BNIP3P32-201ENST00000600015 554 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AC098935.2-201ENST00000604222 466 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 AC000123.3-201ENST00000624029 4975 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
AP1S1P61966 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S1P61966 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
AP1S1P61966 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S1P61966 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S1P61966 AL136164.3-201ENST00000624429 3978 ntBASIC4.79□□□□□ -1.64
AP1S1P61966 AC027228.2-201ENST00000567141 2154 ntBASIC4.78□□□□□ -1.64
AP1S1P61966 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S1P61966 NEAT1-202ENST00000501122 22743 ntBASIC4.78□□□□□ -1.64
AP1S1P61966 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S1P61966 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S1P61966 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S1P61966 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S1P61966 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.78□□□□□ -1.64
AP1S1P61966 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S1P61966 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S1P61966 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP1S1P61966 ARL4AP5-201ENST00000404372 599 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms