Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SCARNA15-201ENST00000607520 4325 ntBASIC5.41□□□□□ -1.54
CDH8P55286 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH8P55286 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH8P55286 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CDH8P55286 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH8P55286 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH8P55286 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH8P55286 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AL034374.1-201ENST00000406329 351 ntBASIC5.4□□□□□ -1.54
CDH8P55286 SNORA77-201ENST00000408716 125 ntBASIC5.4□□□□□ -1.54
CDH8P55286 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 RN7SKP16-201ENST00000410180 299 ntBASIC5.4□□□□□ -1.54
CDH8P55286 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH8P55286 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH8P55286 ARL2BPP3-201ENST00000421226 480 ntBASIC5.4□□□□□ -1.54
CDH8P55286 DDX39BP1-205ENST00000422507 192 ntBASIC5.4□□□□□ -1.54
CDH8P55286 OR6K4P-201ENST00000423179 955 ntBASIC5.4□□□□□ -1.54
CDH8P55286 HSPE1P16-201ENST00000426640 348 ntBASIC5.4□□□□□ -1.54
CDH8P55286 COX6CP13-201ENST00000428703 226 ntBASIC5.4□□□□□ -1.54
CDH8P55286 RBMY2QP-201ENST00000429799 1147 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH8P55286 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH8P55286 PSMC1P13-201ENST00000458195 985 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AC091180.1-201ENST00000462104 372 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH8P55286 CDH12P2-201ENST00000504393 298 ntBASIC5.4□□□□□ -1.54
CDH8P55286 ASNSP4-201ENST00000511103 447 ntBASIC5.4□□□□□ -1.54
CDH8P55286 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH8P55286 RNA5SP43-201ENST00000516559 110 ntBASIC5.4□□□□□ -1.54
CDH8P55286 RN7SKP260-201ENST00000516907 149 ntBASIC5.4□□□□□ -1.54
CDH8P55286 SNORA76.2-201ENST00000517095 137 ntBASIC5.4□□□□□ -1.54
CDH8P55286 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH8P55286 AP000859.1-201ENST00000525536 307 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AP000676.2-201ENST00000529711 301 ntBASIC5.4□□□□□ -1.54
CDH8P55286 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH8P55286 OR7E128P-201ENST00000532736 1024 ntBASIC5.4□□□□□ -1.54
CDH8P55286 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH8P55286 AL512310.9-201ENST00000553311 948 ntBASIC5.4□□□□□ -1.54
CDH8P55286 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH8P55286 AC027216.1-201ENST00000577726 685 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH8P55286 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH8P55286 ZNF92P2-201ENST00000600543 1059 ntBASIC5.4□□□□□ -1.54
CDH8P55286 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH8P55286 AC133644.2-201ENST00000608142 540 ntBASIC5.4□□□□□ -1.54
CDH8P55286 MIR1264-201ENST00000616374 69 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AC074140.1-201ENST00000621617 208 ntBASIC5.4□□□□□ -1.54
CDH8P55286 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH8P55286 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH8P55286 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.4□□□□□ -1.55
CDH8P55286 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
CDH8P55286 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH8P55286 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH8P55286 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.4□□□□□ -1.55
CDH8P55286 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH8P55286 AL022311.1-201ENST00000623726 19416 ntBASIC5.4□□□□□ -1.55
CDH8P55286 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH8P55286 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH8P55286 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDH8P55286 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH8P55286 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH8P55286 RNA5SP123-201ENST00000363244 119 ntBASIC5.39□□□□□ -1.55
CDH8P55286 RNA5SP428-201ENST00000365129 132 ntBASIC5.39□□□□□ -1.55
CDH8P55286 SNORA66-201ENST00000384792 133 ntBASIC5.39□□□□□ -1.55
CDH8P55286 MIR550A3-201ENST00000390735 95 ntBASIC5.39□□□□□ -1.55
CDH8P55286 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH8P55286 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH8P55286 AL121882.1-201ENST00000422893 417 ntBASIC5.39□□□□□ -1.55
CDH8P55286 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH8P55286 EIF2S2P3-201ENST00000428356 999 ntBASIC5.39□□□□□ -1.55
CDH8P55286 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH8P55286 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH8P55286 AL772161.1-201ENST00000439130 476 ntBASIC5.39□□□□□ -1.55
CDH8P55286 ELOCP3-201ENST00000439303 348 ntBASIC5.39□□□□□ -1.55
CDH8P55286 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH8P55286 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDH8P55286 AC116562.1-201ENST00000485355 781 ntBASIC5.39□□□□□ -1.55
CDH8P55286 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH8P55286 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH8P55286 NDUFB5P1-201ENST00000508134 564 ntBASIC5.39□□□□□ -1.55
CDH8P55286 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH8P55286 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH8P55286 COX6B1P5-201ENST00000509843 249 ntBASIC5.39□□□□□ -1.55
CDH8P55286 AC012339.2-201ENST00000523996 453 ntBASIC5.39□□□□□ -1.55
CDH8P55286 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH8P55286 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH8P55286 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH8P55286 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH8P55286 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH8P55286 AC079148.1-201ENST00000565944 819 ntBASIC5.39□□□□□ -1.55
CDH8P55286 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH8P55286 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH8P55286 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH8P55286 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms