Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA1P49639 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXA1P49639 SNORA51.9-201ENST00000384295 124 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 SNORD56.6-201ENST00000384569 71 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 MIR130B-202ENST00000385018 82 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXA1P49639 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXA1P49639 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 GAPDHP15-201ENST00000398586 975 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
HOXA1P49639 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 RPS6P23-201ENST00000413224 722 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 MRPL53P1-201ENST00000414323 319 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AL592310.1-201ENST00000414330 671 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 NANOGP5-201ENST00000424456 877 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 GAPDHP34-201ENST00000432112 823 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 ARF4P4-201ENST00000439608 520 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC000041.1-201ENST00000439655 175 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC073465.2-201ENST00000440938 498 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXA1P49639 RPL5P7-201ENST00000444235 813 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 MTND1P33-201ENST00000446251 917 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 CFL1P4-201ENST00000451536 498 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC098826.2-201ENST00000452011 651 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 AL122020.1-201ENST00000472287 459 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 TPT1P3-201ENST00000492841 512 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 AC093752.1-206ENST00000511823 336 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC139365.2-201ENST00000517972 253 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA1P49639 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXA1P49639 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXA1P49639 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA1P49639 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 PRPF19P1-201ENST00000584766 898 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA1P49639 SNORD91B-202ENST00000608459 222 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC093673.2-201ENST00000609674 331 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC092266.1-201ENST00000610958 165 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 AC006386.1-201ENST00000619436 415 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 AC022079.2-201ENST00000619739 566 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HOXA1P49639 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HOXA1P49639 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 AC068870.1-201ENST00000563737 2455 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA1P49639 SALL4P2-201ENST00000423288 2910 ntBASIC4.52□□□□□ -1.69
HOXA1P49639 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA1P49639 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXA1P49639 AL606537.1-201ENST00000607258 2011 ntBASIC4.51□□□□□ -1.69
HOXA1P49639 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HOXA1P49639 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HOXA1P49639 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA1P49639 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA1P49639 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA1P49639 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXA1P49639 RNU5B-1-201ENST00000363286 116 ntBASIC4.51□□□□□ -1.69
HOXA1P49639 RNA5SP28-201ENST00000363841 119 ntBASIC4.51□□□□□ -1.69
HOXA1P49639 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA1P49639 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA1P49639 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA1P49639 UBE2V1P9-201ENST00000414760 368 ntBASIC4.51□□□□□ -1.69
HOXA1P49639 Z93019.1-201ENST00000416450 973 ntBASIC4.51□□□□□ -1.69
HOXA1P49639 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA1P49639 RPL7P56-201ENST00000429441 717 ntBASIC4.51□□□□□ -1.69
HOXA1P49639 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HOXA1P49639 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA1P49639 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms