Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.19□□□□□ -1.26
LMNB1P20700 AC006927.3-201ENST00000638789 384 ntBASIC7.19□□□□□ -1.26
LMNB1P20700 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LMNB1P20700 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LMNB1P20700 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LMNB1P20700 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
LMNB1P20700 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LMNB1P20700 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.19□□□□□ -1.26
LMNB1P20700 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LMNB1P20700 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.19□□□□□ -1.26
LMNB1P20700 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.19□□□□□ -1.26
LMNB1P20700 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LMNB1P20700 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.19□□□□□ -1.26
LMNB1P20700 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
LMNB1P20700 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 RNA5SP27-201ENST00000363839 119 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LMNB1P20700 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 AC006960.1-201ENST00000419980 153 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC006366.1-201ENST00000422002 759 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.18□□□□□ -1.26
LMNB1P20700 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 AL451136.1-201ENST00000435399 325 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 CYCSP12-201ENST00000437729 300 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 OR51K1P-201ENST00000510214 950 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 SCARNA6.1-201ENST00000516989 238 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 CR383656.6-201ENST00000550518 394 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.18□□□□□ -1.26
LMNB1P20700 MIR4646-201ENST00000580775 63 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 MIR4260-201ENST00000583107 67 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 AC068020.1-201ENST00000594215 661 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC078795.2-201ENST00000602835 1252 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC130352.1-201ENST00000602979 661 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AL583832.1-201ENST00000603227 784 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC021749.1-201ENST00000604322 607 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC145423.1-201ENST00000605712 336 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 AC133644.2-201ENST00000608142 540 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LMNB1P20700 AP001541.1-201ENST00000623322 1904 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LMNB1P20700 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 AC007938.2-201ENST00000604666 2634 ntBASIC7.18□□□□□ -1.26
LMNB1P20700 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
LMNB1P20700 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.18□□□□□ -1.26
LMNB1P20700 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.18□□□□□ -1.26
LMNB1P20700 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
LMNB1P20700 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.18□□□□□ -1.26
LMNB1P20700 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LMNB1P20700 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LMNB1P20700 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LMNB1P20700 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.17□□□□□ -1.26
LMNB1P20700 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LMNB1P20700 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
LMNB1P20700 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.17□□□□□ -1.26
LMNB1P20700 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.17□□□□□ -1.26
LMNB1P20700 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LMNB1P20700 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.17□□□□□ -1.26
LMNB1P20700 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
LMNB1P20700 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LMNB1P20700 Y_RNA.192-201ENST00000363977 102 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.17□□□□□ -1.26
LMNB1P20700 AC022028.1-201ENST00000412054 408 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 METTL15P3-201ENST00000415522 1221 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.17□□□□□ -1.26
LMNB1P20700 AC098592.1-201ENST00000419352 333 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.17□□□□□ -1.26
LMNB1P20700 AC005033.1-201ENST00000428904 813 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.17□□□□□ -1.26
LMNB1P20700 NMNAT1P2-201ENST00000435192 860 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 YWHAZP7-201ENST00000436906 631 ntBASIC7.17□□□□□ -1.26
LMNB1P20700 AL592437.1-201ENST00000443781 492 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms