Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5□□□□□ -1.61
CDH1P12830 AL022393.1-201ENST00000625142 1677 ntBASIC5□□□□□ -1.61
CDH1P12830 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDH1P12830 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5□□□□□ -1.61
CDH1P12830 MIR600-201ENST00000385007 98 ntBASIC5□□□□□ -1.61
CDH1P12830 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 MTATP6P31-201ENST00000406985 692 ntBASIC5□□□□□ -1.61
CDH1P12830 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5□□□□□ -1.61
CDH1P12830 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5□□□□□ -1.61
CDH1P12830 RPS4XP16-201ENST00000427198 791 ntBASIC5□□□□□ -1.61
CDH1P12830 MTCO1P51-201ENST00000427672 1060 ntBASIC5□□□□□ -1.61
CDH1P12830 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5□□□□□ -1.61
CDH1P12830 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5□□□□□ -1.61
CDH1P12830 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5□□□□□ -1.61
CDH1P12830 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5□□□□□ -1.61
CDH1P12830 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5□□□□□ -1.61
CDH1P12830 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5□□□□□ -1.61
CDH1P12830 OR8X1P-201ENST00000534542 869 ntBASIC5□□□□□ -1.61
CDH1P12830 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5□□□□□ -1.61
CDH1P12830 AC024940.3-201ENST00000538551 316 ntBASIC5□□□□□ -1.61
CDH1P12830 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5□□□□□ -1.61
CDH1P12830 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CDH1P12830 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5□□□□□ -1.61
CDH1P12830 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5□□□□□ -1.61
CDH1P12830 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 AC012213.4-201ENST00000606457 354 ntBASIC5□□□□□ -1.61
CDH1P12830 AC027449.1-201ENST00000608890 407 ntBASIC5□□□□□ -1.61
CDH1P12830 AL050303.3-201ENST00000613704 284 ntBASIC5□□□□□ -1.61
CDH1P12830 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5□□□□□ -1.61
CDH1P12830 AC068880.4-201ENST00000623082 495 ntBASIC5□□□□□ -1.61
CDH1P12830 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDH1P12830 OR4G3P-201ENST00000633500 913 ntBASIC5□□□□□ -1.61
CDH1P12830 AC017002.4-201ENST00000604721 1525 ntBASIC5□□□□□ -1.61
CDH1P12830 SAMMSON-213ENST00000641336 1521 ntBASIC5□□□□□ -1.61
CDH1P12830 AL672167.1-204ENST00000641875 3017 ntBASIC5□□□□□ -1.61
CDH1P12830 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 CASC19-261ENST00000641853 1638 ntBASIC5□□□□□ -1.61
CDH1P12830 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5□□□□□ -1.61
CDH1P12830 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH1P12830 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH1P12830 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH1P12830 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH1P12830 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH1P12830 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH1P12830 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH1P12830 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH1P12830 Z86062.1-201ENST00000406773 777 ntBASIC4.99□□□□□ -1.61
CDH1P12830 ARL2BPP3-201ENST00000421226 480 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AL355433.1-201ENST00000422804 300 ntBASIC4.99□□□□□ -1.61
CDH1P12830 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH1P12830 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH1P12830 AL606490.7-201ENST00000433136 191 ntBASIC4.99□□□□□ -1.61
CDH1P12830 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH1P12830 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH1P12830 MOB1AP2-201ENST00000446060 614 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AURKAPS1-201ENST00000451805 1212 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH1P12830 RN7SL172P-201ENST00000460535 303 ntBASIC4.99□□□□□ -1.61
CDH1P12830 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH1P12830 AC020779.1-201ENST00000478757 796 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH1P12830 AC108729.1-201ENST00000487812 947 ntBASIC4.99□□□□□ -1.61
CDH1P12830 RN7SL30P-201ENST00000488416 306 ntBASIC4.99□□□□□ -1.61
CDH1P12830 RN7SL205P-201ENST00000490174 284 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AC072052.1-201ENST00000496556 306 ntBASIC4.99□□□□□ -1.61
CDH1P12830 HIGD1AP14-201ENST00000507617 282 ntBASIC4.99□□□□□ -1.61
CDH1P12830 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH1P12830 AC093770.1-201ENST00000511559 571 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH1P12830 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH1P12830 AC016550.3-201ENST00000515706 767 ntBASIC4.99□□□□□ -1.61
CDH1P12830 RNU6-334P-201ENST00000517072 102 ntBASIC4.99□□□□□ -1.61
CDH1P12830 HMGB1P46-201ENST00000520062 610 ntBASIC4.99□□□□□ -1.61
CDH1P12830 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH1P12830 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH1P12830 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.99□□□□□ -1.61
CDH1P12830 C1DP5-201ENST00000525775 383 ntBASIC4.99□□□□□ -1.61
CDH1P12830 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH1P12830 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH1P12830 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CDH1P12830 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH1P12830 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH1P12830 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH1P12830 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH1P12830 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms