Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 UBBP2-201ENST00000376781 231 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.24□□□□□ -1.73
FREM3P0C091 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.24□□□□□ -1.73
FREM3P0C091 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC011005.3-201ENST00000491624 395 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AC023424.1-201ENST00000496058 459 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.24□□□□□ -1.73
FREM3P0C091 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.24□□□□□ -1.73
FREM3P0C091 IMMP1LP1-201ENST00000605170 488 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 MIR6853-201ENST00000619642 74 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC008033.1-201ENST00000216407 1162 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AC010132.2-201ENST00000295493 1043 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AL049693.1-201ENST00000402760 611 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AC004690.1-201ENST00000418216 328 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC006967.1-201ENST00000467608 589 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC068790.4-201ENST00000602474 263 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.24□□□□□ -1.73
FREM3P0C091 AC008782.1-201ENST00000603386 430 ntBASIC4.24□□□□□ -1.73
FREM3P0C091 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.24□□□□□ -1.73
FREM3P0C091 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FREM3P0C091 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.23□□□□□ -1.73
FREM3P0C091 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 AC126323.6-202ENST00000568092 3511 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 RN7SKP74-201ENST00000362849 309 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 RN7SKP186-201ENST00000365371 303 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 AL359643.1-201ENST00000404109 423 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.23□□□□□ -1.73
FREM3P0C091 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.23□□□□□ -1.73
FREM3P0C091 GTF3AP5-201ENST00000442645 697 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 CEACAMP10-202ENST00000495431 496 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.23□□□□□ -1.73
FREM3P0C091 RNU6-513P-201ENST00000516104 104 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.23□□□□□ -1.73
FREM3P0C091 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.23□□□□□ -1.73
FREM3P0C091 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FREM3P0C091 AC115286.1-201ENST00000604298 434 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 AL023583.1-201ENST00000607518 1143 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 OR8G7P-201ENST00000616658 848 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 AC015804.1-201ENST00000622935 435 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 OR2L1P-202ENST00000641567 1023 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.23□□□□□ -1.73
FREM3P0C091 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FREM3P0C091 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.23□□□□□ -1.73
FREM3P0C091 AL592148.3-201ENST00000608771 2646 ntBASIC4.23□□□□□ -1.73
FREM3P0C091 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FREM3P0C091 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
FREM3P0C091 AC068538.1-201ENST00000376856 336 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
FREM3P0C091 AL583835.1-201ENST00000399570 407 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 ELOCP19-201ENST00000411919 318 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 AP001324.1-201ENST00000428553 399 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.22□□□□□ -1.73
FREM3P0C091 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.22□□□□□ -1.73
FREM3P0C091 AL513533.1-201ENST00000453728 415 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.22□□□□□ -1.73
FREM3P0C091 NDUFA5P9-201ENST00000472609 340 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 MIR5096-201ENST00000583713 70 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.22□□□□□ -1.73
FREM3P0C091 U3.53-201ENST00000628922 216 ntBASIC4.22□□□□□ -1.73
FREM3P0C091 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
FREM3P0C091 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms