Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF40O75150 RPEP2-201ENST00000432149 701 ntBASIC7.94□□□□□ -1.14
RNF40O75150 MTCO1P27-201ENST00000448269 226 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.94□□□□□ -1.14
RNF40O75150 RN7SL36P-201ENST00000469345 276 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC024558.1-201ENST00000505008 528 ntBASIC7.94□□□□□ -1.14
RNF40O75150 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF40O75150 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.94□□□□□ -1.14
RNF40O75150 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
RNF40O75150 RNU6-583P-201ENST00000516012 92 ntBASIC7.94□□□□□ -1.14
RNF40O75150 SNORA48.10-201ENST00000516965 160 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC138832.1-201ENST00000522871 556 ntBASIC7.94□□□□□ -1.14
RNF40O75150 ATP5J2P4-201ENST00000538774 267 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.94□□□□□ -1.14
RNF40O75150 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.94□□□□□ -1.14
RNF40O75150 COX6CP11-201ENST00000555293 229 ntBASIC7.94□□□□□ -1.14
RNF40O75150 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF40O75150 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.94□□□□□ -1.14
RNF40O75150 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF40O75150 RPS28P1-201ENST00000604589 187 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC087623.4-201ENST00000606593 695 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AL451049.1-201ENST00000608672 497 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.94□□□□□ -1.14
RNF40O75150 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.94□□□□□ -1.14
RNF40O75150 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RNF40O75150 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
RNF40O75150 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.94□□□□□ -1.14
RNF40O75150 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF40O75150 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 OR4G1P-203ENST00000641984 1631 ntBASIC7.93□□□□□ -1.14
RNF40O75150 FOLH1B-202ENST00000529567 2145 ntBASIC7.93□□□□□ -1.14
RNF40O75150 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 AC003985.2-201ENST00000562268 1669 ntBASIC7.93□□□□□ -1.14
RNF40O75150 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
RNF40O75150 RNA5SP79-201ENST00000365193 109 ntBASIC7.93□□□□□ -1.14
RNF40O75150 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF40O75150 RNU6-1062P-201ENST00000383908 107 ntBASIC7.93□□□□□ -1.14
RNF40O75150 SNORD15A-201ENST00000384214 148 ntBASIC7.93□□□□□ -1.14
RNF40O75150 SNORA7B-201ENST00000384360 139 ntBASIC7.93□□□□□ -1.14
RNF40O75150 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF40O75150 RNA5SP185-201ENST00000390963 114 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 MTND4LP17-201ENST00000414607 293 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF40O75150 RAC1P4-201ENST00000419413 579 ntBASIC7.93□□□□□ -1.14
RNF40O75150 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 NIP7P1-201ENST00000433227 512 ntBASIC7.93□□□□□ -1.14
RNF40O75150 Z83313.1-201ENST00000433780 718 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF40O75150 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 AMYP1-201ENST00000440059 1023 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AL591379.2-201ENST00000450223 397 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF40O75150 AL390728.3-201ENST00000452704 270 ntBASIC7.93□□□□□ -1.14
RNF40O75150 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF40O75150 AC104849.1-201ENST00000462623 405 ntBASIC7.93□□□□□ -1.14
RNF40O75150 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
RNF40O75150 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF40O75150 AC106872.3-201ENST00000495104 446 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 AC108120.1-201ENST00000506543 991 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF40O75150 AC093303.1-201ENST00000514549 295 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF40O75150 RNU6-1003P-201ENST00000517099 105 ntBASIC7.93□□□□□ -1.14
RNF40O75150 SUB1P1-201ENST00000524415 382 ntBASIC7.93□□□□□ -1.14
RNF40O75150 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF40O75150 AC011193.2-201ENST00000582638 367 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC005357.1-201ENST00000588399 301 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF40O75150 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF40O75150 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.93□□□□□ -1.14
RNF40O75150 RMST_9.1-201ENST00000619945 193 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AC027506.1-201ENST00000621395 198 ntBASIC7.93□□□□□ -1.14
RNF40O75150 AL359757.2-201ENST00000624309 274 ntBASIC7.93□□□□□ -1.14
RNF40O75150 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
RNF40O75150 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 HSPA8P11-201ENST00000508840 1898 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms