Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN2BO60939 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 RPL23P2-201ENST00000320371 421 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 RNA5SP455-201ENST00000365190 119 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN2BO60939 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN2BO60939 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 RAB9AP5-201ENST00000437794 597 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN2BO60939 RAB9AP2-201ENST00000443911 597 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 PTMAP3-201ENST00000447474 330 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN2BO60939 RPL10P17-201ENST00000453852 316 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 RPS6P2-201ENST00000454208 705 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 OR2AF1P-201ENST00000454899 889 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 FKBP1BP1-201ENST00000553366 325 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AL049839.1-201ENST00000556151 657 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 SNORA74C-1-201ENST00000580726 201 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN2BO60939 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN2BO60939 AC131238.1-201ENST00000617135 328 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 AL353662.3-201ENST00000625131 237 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN2BO60939 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN2BO60939 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN2BO60939 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SCN2BO60939 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN2BO60939 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN2BO60939 AC126323.6-202ENST00000568092 3511 ntBASIC4.58□□□□□ -1.68
SCN2BO60939 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN2BO60939 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 AL359922.3-201ENST00000624779 1670 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN2BO60939 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN2BO60939 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SCN2BO60939 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 RNU6-171P-201ENST00000384354 107 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN2BO60939 RN7SKP273-201ENST00000411392 314 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 GTF2IP5-201ENST00000414608 731 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 RPL7P57-201ENST00000423238 740 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN2BO60939 RPL7P11-201ENST00000437586 658 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN2BO60939 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC018638.3-201ENST00000461273 132 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN2BO60939 RNA5SP92-201ENST00000516437 110 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 OR10G5P-201ENST00000532733 358 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC093249.4-201ENST00000564755 259 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC093799.2-201ENST00000610062 578 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 AL355480.1-201ENST00000629041 99 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
SCN2BO60939 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN2BO60939 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN2BO60939 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN2BO60939 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SCN2BO60939 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN2BO60939 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 DDX18P4-201ENST00000511690 1966 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN2BO60939 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 AC000123.3-201ENST00000624029 4975 ntBASIC4.56□□□□□ -1.68
SCN2BO60939 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN2BO60939 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms