Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNSO60931 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNSO60931 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNSO60931 HMGB3P16-201ENST00000508037 287 ntBASIC4.55□□□□□ -1.68
CTNSO60931 RNU6-709P-201ENST00000517257 104 ntBASIC4.55□□□□□ -1.68
CTNSO60931 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNSO60931 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.55□□□□□ -1.68
CTNSO60931 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNSO60931 BUD31P1-201ENST00000521828 359 ntBASIC4.55□□□□□ -1.68
CTNSO60931 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.55□□□□□ -1.68
CTNSO60931 MIR4436B2-201ENST00000581415 91 ntBASIC4.55□□□□□ -1.68
CTNSO60931 MIR4436B1-201ENST00000583272 91 ntBASIC4.55□□□□□ -1.68
CTNSO60931 AP002884.5-201ENST00000595053 1132 ntBASIC4.55□□□□□ -1.68
CTNSO60931 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.55□□□□□ -1.68
CTNSO60931 AC096553.1-201ENST00000605169 829 ntBASIC4.55□□□□□ -1.68
CTNSO60931 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.55□□□□□ -1.68
CTNSO60931 AC012414.7-202ENST00000622705 1090 ntBASIC4.55□□□□□ -1.68
CTNSO60931 AP003499.2-201ENST00000624100 483 ntBASIC4.55□□□□□ -1.68
CTNSO60931 AC006453.5-201ENST00000636451 619 ntBASIC4.55□□□□□ -1.68
CTNSO60931 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.55□□□□□ -1.68
CTNSO60931 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTNSO60931 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CTNSO60931 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.55□□□□□ -1.68
CTNSO60931 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNSO60931 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.54□□□□□ -1.68
CTNSO60931 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.54□□□□□ -1.68
CTNSO60931 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.54□□□□□ -1.68
CTNSO60931 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTNSO60931 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTNSO60931 DDX18P5-201ENST00000534547 1306 ntBASIC4.54□□□□□ -1.68
CTNSO60931 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 SDAD1P1-202ENST00000524156 2051 ntBASIC4.54□□□□□ -1.68
CTNSO60931 CASC19-204ENST00000641001 2055 ntBASIC4.54□□□□□ -1.68
CTNSO60931 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTNSO60931 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 AC013470.3-201ENST00000420252 1194 ntBASIC4.54□□□□□ -1.68
CTNSO60931 AC104837.2-201ENST00000427236 424 ntBASIC4.54□□□□□ -1.68
CTNSO60931 RPS17P8-201ENST00000434525 335 ntBASIC4.54□□□□□ -1.68
CTNSO60931 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.54□□□□□ -1.68
CTNSO60931 RPS5P7-201ENST00000456664 608 ntBASIC4.54□□□□□ -1.68
CTNSO60931 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.54□□□□□ -1.68
CTNSO60931 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.54□□□□□ -1.68
CTNSO60931 RNA5SP249-201ENST00000516127 99 ntBASIC4.54□□□□□ -1.68
CTNSO60931 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.54□□□□□ -1.68
CTNSO60931 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.54□□□□□ -1.68
CTNSO60931 MIR4675-201ENST00000577898 77 ntBASIC4.54□□□□□ -1.68
CTNSO60931 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.54□□□□□ -1.68
CTNSO60931 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.54□□□□□ -1.68
CTNSO60931 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.54□□□□□ -1.68
CTNSO60931 AC022726.1-201ENST00000587475 207 ntBASIC4.54□□□□□ -1.68
CTNSO60931 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.54□□□□□ -1.68
CTNSO60931 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.54□□□□□ -1.68
CTNSO60931 AC015871.5-202ENST00000623252 701 ntBASIC4.54□□□□□ -1.68
CTNSO60931 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 NCLP2-201ENST00000416078 1462 ntBASIC4.54□□□□□ -1.68
CTNSO60931 MAPK10-349ENST00000641767 3661 ntBASIC4.54□□□□□ -1.68
CTNSO60931 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTNSO60931 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.54□□□□□ -1.68
CTNSO60931 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTNSO60931 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
CTNSO60931 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTNSO60931 DDX18P3-201ENST00000404856 2007 ntBASIC4.53□□□□□ -1.68
CTNSO60931 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNSO60931 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CTNSO60931 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNSO60931 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTNSO60931 RNA5SP113-201ENST00000410486 84 ntBASIC4.53□□□□□ -1.68
CTNSO60931 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNSO60931 TMBIM7P-201ENST00000418074 855 ntBASIC4.53□□□□□ -1.68
CTNSO60931 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNSO60931 LINC00993-201ENST00000420453 540 ntBASIC4.53□□□□□ -1.68
CTNSO60931 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.53□□□□□ -1.68
CTNSO60931 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNSO60931 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNSO60931 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.53□□□□□ -1.68
CTNSO60931 OR1H1P-201ENST00000448731 937 ntBASIC4.53□□□□□ -1.68
CTNSO60931 AC091685.2-201ENST00000454924 864 ntBASIC4.53□□□□□ -1.68
CTNSO60931 AL591473.1-201ENST00000464297 313 ntBASIC4.53□□□□□ -1.68
CTNSO60931 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNSO60931 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.53□□□□□ -1.68
CTNSO60931 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTNSO60931 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.53□□□□□ -1.68
CTNSO60931 RFPL4AP3-201ENST00000515267 345 ntBASIC4.53□□□□□ -1.68
CTNSO60931 AC138938.1-201ENST00000515431 782 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms