Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 OR52B5P-201ENST00000435337 951 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.78□□□□□ -1.64
LSM1O15116 TCEA1P1-201ENST00000449716 880 ntBASIC4.78□□□□□ -1.64
LSM1O15116 IGHV5-78-201ENST00000450948 295 ntBASIC4.78□□□□□ -1.64
LSM1O15116 CCDC75P1-201ENST00000469247 791 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC105918.1-201ENST00000474399 838 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC037198.2-201ENST00000478845 733 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC090686.1-201ENST00000481577 749 ntBASIC4.78□□□□□ -1.64
LSM1O15116 RPS4XP1-201ENST00000482189 787 ntBASIC4.78□□□□□ -1.64
LSM1O15116 RPS21P4-201ENST00000487122 248 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AL136038.1-201ENST00000497246 351 ntBASIC4.78□□□□□ -1.64
LSM1O15116 STMN1P2-201ENST00000508435 439 ntBASIC4.78□□□□□ -1.64
LSM1O15116 VWA8P1-201ENST00000510889 176 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 BX510359.5-201ENST00000515651 304 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.78□□□□□ -1.64
LSM1O15116 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.78□□□□□ -1.64
LSM1O15116 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LSM1O15116 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.78□□□□□ -1.64
LSM1O15116 MIR8069-1-201ENST00000616627 86 ntBASIC4.78□□□□□ -1.64
LSM1O15116 MIR8069-2-201ENST00000621412 86 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.78□□□□□ -1.64
LSM1O15116 OR52B5P-202ENST00000641118 1110 ntBASIC4.78□□□□□ -1.64
LSM1O15116 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 AC009643.2-201ENST00000603543 1448 ntBASIC4.78□□□□□ -1.64
LSM1O15116 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
LSM1O15116 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.77□□□□□ -1.65
LSM1O15116 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 Y_RNA.62-201ENST00000362840 99 ntBASIC4.77□□□□□ -1.65
LSM1O15116 RNU6-697P-201ENST00000363348 107 ntBASIC4.77□□□□□ -1.65
LSM1O15116 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 HSPD1P16-201ENST00000402302 394 ntBASIC4.77□□□□□ -1.65
LSM1O15116 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 AL160275.2-201ENST00000412010 394 ntBASIC4.77□□□□□ -1.65
LSM1O15116 CKS1BP6-201ENST00000424932 240 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AL121776.1-201ENST00000429337 372 ntBASIC4.77□□□□□ -1.65
LSM1O15116 OR6C71P-201ENST00000432580 913 ntBASIC4.77□□□□□ -1.65
LSM1O15116 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 SCAND3P1-201ENST00000439854 1060 ntBASIC4.77□□□□□ -1.65
LSM1O15116 ARL4AP3-201ENST00000441452 574 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.77□□□□□ -1.65
LSM1O15116 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.77□□□□□ -1.65
LSM1O15116 RHEBP2-201ENST00000450289 600 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC092647.2-201ENST00000452998 253 ntBASIC4.77□□□□□ -1.65
LSM1O15116 RPL7P39-201ENST00000481157 744 ntBASIC4.77□□□□□ -1.65
LSM1O15116 RN7SL809P-201ENST00000482040 297 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC020890.1-201ENST00000491837 504 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC024558.1-201ENST00000505008 528 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC021146.3-201ENST00000511911 260 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.77□□□□□ -1.65
LSM1O15116 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.77□□□□□ -1.65
LSM1O15116 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.77□□□□□ -1.65
LSM1O15116 RNA5SP497-201ENST00000516081 97 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.77□□□□□ -1.65
LSM1O15116 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.77□□□□□ -1.65
LSM1O15116 AC026688.1-201ENST00000520639 1168 ntBASIC4.77□□□□□ -1.65
LSM1O15116 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.77□□□□□ -1.65
LSM1O15116 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.77□□□□□ -1.65
LSM1O15116 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.77□□□□□ -1.65
LSM1O15116 AC105254.2-201ENST00000603636 436 ntBASIC4.77□□□□□ -1.65
LSM1O15116 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.77□□□□□ -1.65
LSM1O15116 AC026124.2-201ENST00000621847 656 ntBASIC4.77□□□□□ -1.65
LSM1O15116 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
LSM1O15116 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
LSM1O15116 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.77□□□□□ -1.65
LSM1O15116 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LSM1O15116 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.76□□□□□ -1.65
LSM1O15116 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 RN7SKP160-201ENST00000363804 340 ntBASIC4.76□□□□□ -1.65
LSM1O15116 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LSM1O15116 MT-RNR1-201ENST00000389680 954 ntBASIC4.76□□□□□ -1.65
LSM1O15116 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 EIF4A1P1-201ENST00000420241 934 ntBASIC4.76□□□□□ -1.65
LSM1O15116 DDX39BP1-205ENST00000422507 192 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 RPS26P4-201ENST00000431743 355 ntBASIC4.76□□□□□ -1.65
LSM1O15116 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.76□□□□□ -1.65
LSM1O15116 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms